The 2.0 version of rSNPBase

Variant report

Variant rs16927620
Chromosome Location chr10:27486558-27486559
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27445400-27490800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr10:27446400-27490800 Weak transcription Fetal Brain Male brain
3 chr10:27446400-27499200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr10:27446400-27508400 Weak transcription Small Intestine intestine
5 chr10:27449600-27487200 Weak transcription Colon Smooth Muscle Colon
6 chr10:27453000-27487000 Weak transcription Spleen Spleen
7 chr10:27454800-27487000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr10:27455000-27494600 Weak transcription Aorta Aorta
9 chr10:27455000-27495200 Weak transcription Right Ventricle heart
10 chr10:27455400-27492200 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr10:27455600-27494600 Weak transcription Pancreas Pancrea
12 chr10:27456200-27490800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr10:27456200-27496800 Weak transcription Esophagus oesophagus
14 chr10:27456800-27487000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr10:27459200-27489800 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr10:27464800-27492800 Weak transcription HSMMtube muscle
17 chr10:27466800-27488400 Weak transcription HepG2 liver
18 chr10:27469800-27490600 Weak transcription Gastric stomach
19 chr10:27473200-27487600 Weak transcription Lung lung
20 chr10:27473200-27524200 Weak transcription Stomach Mucosa stomach
21 chr10:27474200-27487200 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr10:27474200-27489600 Weak transcription Ovary ovary
23 chr10:27474200-27490600 Weak transcription Brain Anterior Caudate brain
24 chr10:27474200-27490800 Weak transcription Fetal Kidney kidney
25 chr10:27474200-27494400 Weak transcription NHEK skin
26 chr10:27474200-27512000 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr10:27474400-27486600 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr10:27474400-27492800 Weak transcription Brain Inferior Temporal Lobe brain
29 chr10:27475600-27488000 Weak transcription Fetal Muscle Trunk muscle
30 chr10:27475600-27490800 Weak transcription Brain Cingulate Gyrus brain
31 chr10:27475600-27528600 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr10:27476000-27487200 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr10:27476000-27487400 Weak transcription Brain Hippocampus Middle brain
34 chr10:27476000-27488000 Weak transcription Placenta Amnion Placenta Amnion
35 chr10:27476000-27488200 Weak transcription Rectal Smooth Muscle rectum
36 chr10:27476000-27488400 Weak transcription Stomach Smooth Muscle stomach
37 chr10:27476000-27490600 Weak transcription Fetal Lung lung
38 chr10:27476000-27490800 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr10:27476000-27492800 Weak transcription Hela-S3 cervix
40 chr10:27476200-27492000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr10:27476200-27493000 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr10:27476200-27528600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr10:27476400-27487200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr10:27476400-27499000 Weak transcription H9 Cell Line embryonic stem cell
45 chr10:27476600-27486600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr10:27476600-27486600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr10:27476600-27486600 Weak transcription Fetal Stomach stomach
48 chr10:27476600-27488200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr10:27476600-27492800 Weak transcription H1 Cell Line embryonic stem cell
50 chr10:27476600-27492800 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015