The 2.0 version of rSNPBase

Variant report

Variant rs73598020
Chromosome Location chr10:27399132-27399133
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:27389800-27399600 Weak transcription Placenta Amnion Placenta Amnion
2 chr10:27389800-27441200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr10:27390000-27399200 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr10:27390000-27400200 Weak transcription H9 Cell Line embryonic stem cell
5 chr10:27390000-27400200 Weak transcription HMEC breast
6 chr10:27390000-27400600 Weak transcription NHLF lung
7 chr10:27390000-27401200 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr10:27390000-27406400 Weak transcription Small Intestine intestine
9 chr10:27390000-27408000 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr10:27390000-27442000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr10:27390200-27399400 Weak transcription HUVEC blood vessel
12 chr10:27390200-27400000 Weak transcription Lung lung
13 chr10:27390200-27400400 Weak transcription K562 blood
14 chr10:27390200-27401000 Weak transcription Hela-S3 cervix
15 chr10:27390200-27401200 Weak transcription Psoas Muscle Psoas
16 chr10:27390200-27435000 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr10:27390400-27399200 Weak transcription Duodenum Mucosa Duodenum
18 chr10:27390400-27399800 Weak transcription Pancreas Pancrea
19 chr10:27390400-27399800 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr10:27390400-27400000 Weak transcription Aorta Aorta
21 chr10:27390400-27400000 Weak transcription Colonic Mucosa Colon
22 chr10:27390400-27400200 Weak transcription Brain Hippocampus Middle brain
23 chr10:27390400-27400600 Weak transcription Brain Cingulate Gyrus brain
24 chr10:27390400-27400600 Weak transcription Colon Smooth Muscle Colon
25 chr10:27390400-27400600 Weak transcription Rectal Smooth Muscle rectum
26 chr10:27390400-27400600 Weak transcription NHEK skin
27 chr10:27390400-27400800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr10:27390400-27400800 Weak transcription Primary B cells from cord blood blood
29 chr10:27390400-27401400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr10:27390400-27401400 Weak transcription Esophagus oesophagus
31 chr10:27390400-27401400 Weak transcription Gastric stomach
32 chr10:27390400-27401400 Weak transcription Right Ventricle heart
33 chr10:27390400-27417600 Weak transcription Stomach Mucosa stomach
34 chr10:27390600-27399600 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr10:27390600-27400200 Weak transcription Fetal Brain Male brain
36 chr10:27390600-27400600 Weak transcription HepG2 liver
37 chr10:27390600-27400800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr10:27393800-27438600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr10:27394000-27426600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr10:27394200-27399400 Weak transcription Primary T cells from cord blood blood
41 chr10:27394200-27399800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr10:27394200-27400400 Weak transcription Brain Germinal Matrix brain
43 chr10:27394200-27432600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr10:27394400-27399400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr10:27394400-27400000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr10:27394400-27400000 Weak transcription Spleen Spleen
47 chr10:27394400-27400200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr10:27394400-27400200 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr10:27394400-27400400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr10:27394400-27400800 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015