Variant report

Variant	rs16932325
Chromosome Location	chr8:66655164-66655165
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:66627107..66628672-chr8:66653139..66655185,2	K562	blood:

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs16932251	0.92[ASN][1000 genomes]
rs16932261	1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[ASN][1000 genomes]
rs16932266	1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[ASN][1000 genomes]
rs16932297	0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs16932315	1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs1877639	1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2048649	0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4366113	0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4565495	0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs57016390	0.92[ASN][1000 genomes]
rs73242918	0.92[ASN][1000 genomes]
rs73242920	0.92[ASN][1000 genomes]
rs73242953	0.84[ASN][1000 genomes]
rs73242955	0.84[ASN][1000 genomes]

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66621400-66673000	Weak transcription	Colon Smooth Muscle	Colon
2	chr8:66624600-66661200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:66625600-66661400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
4	chr8:66626200-66664600	Strong transcription	Fetal Thymus	thymus
5	chr8:66626400-66656600	Strong transcription	Primary T cells from cord blood	blood
6	chr8:66626600-66655600	Strong transcription	Primary T cells fromperipheralblood	blood
7	chr8:66628200-66660000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr8:66628200-66660200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr8:66628400-66663800	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr8:66628400-66666600	Strong transcription	Dnd41	blood
11	chr8:66635200-66674000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr8:66635400-66673600	Weak transcription	Brain Substantia Nigra	brain
13	chr8:66635400-66673800	Weak transcription	Brain Cingulate Gyrus	brain
14	chr8:66635400-66674000	Weak transcription	Fetal Brain Male	brain
15	chr8:66638800-66655600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
16	chr8:66641800-66660000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
17	chr8:66645600-66686000	Weak transcription	HSMM	muscle
18	chr8:66646800-66655400	Weak transcription	Colonic Mucosa	Colon
19	chr8:66646800-66664400	Weak transcription	Osteobl	bone
20	chr8:66646800-66670200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr8:66647000-66655600	Weak transcription	Esophagus	oesophagus
22	chr8:66647000-66658800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr8:66647200-66655400	Weak transcription	HUVEC	blood vessel
24	chr8:66647200-66657200	Weak transcription	NHDF-Ad	bronchial
25	chr8:66647400-66664600	Weak transcription	Brain Germinal Matrix	brain
26	chr8:66647600-66660600	Weak transcription	Rectal Smooth Muscle	rectum
27	chr8:66647600-66662000	Weak transcription	Stomach Smooth Muscle	stomach
28	chr8:66647600-66670800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr8:66647600-66673400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr8:66647800-66655400	Weak transcription	Spleen	Spleen
31	chr8:66647800-66695200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
32	chr8:66648000-66668000	Weak transcription	Liver	Liver
33	chr8:66648600-66668000	Weak transcription	Fetal Brain Female	brain
34	chr8:66649000-66668000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr8:66649000-66690200	Weak transcription	H9 Cell Line	embryonic stem cell
36	chr8:66649600-66683800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
37	chr8:66650000-66671400	Weak transcription	Right Ventricle	heart
38	chr8:66651000-66671600	Weak transcription	Cortex derived primary cultured neurospheres	brain
39	chr8:66651000-66673600	Weak transcription	Brain Hippocampus Middle	brain
40	chr8:66651000-66676600	Weak transcription	Fetal Lung	lung
41	chr8:66651200-66673600	Weak transcription	Placenta	Placenta
42	chr8:66651400-66673800	Weak transcription	NHLF	lung
43	chr8:66651600-66655200	Weak transcription	Duodenum Mucosa	Duodenum
44	chr8:66651600-66656800	Weak transcription	Fetal Muscle Leg	muscle
45	chr8:66651600-66657400	Weak transcription	Primary neutrophils fromperipheralblood	blood
46	chr8:66651600-66658400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr8:66651600-66659400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr8:66651600-66662800	Weak transcription	Ovary	ovary
49	chr8:66651600-66662800	Weak transcription	Sigmoid Colon	Sigmoid Colon
50	chr8:66651600-66663200	Weak transcription	Brain Inferior Temporal Lobe	brain

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