Variant report

Variant	rs16937140
Chromosome Location	chr8:49352229-49352230
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:49349539..49351813-chr8:49352061..49354679,2	MCF-7	breast:
2	chr8:49351110..49353457-chr8:49360622..49362528,2	K562	blood:
3	chr8:49349665..49353206-chr8:49353264..49356600,3	K562	blood:

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs16935762	1.00[AMR][1000 genomes]
rs16935785	1.00[AMR][1000 genomes]
rs16937172	0.82[AFR][1000 genomes]
rs55664150	1.00[AMR][1000 genomes]
rs56172225	1.00[AMR][1000 genomes]
rs58676807	1.00[AMR][1000 genomes]
rs59080669	1.00[AMR][1000 genomes]
rs73678262	1.00[AMR][1000 genomes]
rs73678265	1.00[AMR][1000 genomes]
rs73678267	1.00[AMR][1000 genomes]
rs73678268	1.00[AMR][1000 genomes]
rs73678276	1.00[AMR][1000 genomes]
rs73678289	0.82[AFR][1000 genomes]
rs73678290	0.82[AFR][1000 genomes]
rs7819699	1.00[AMR][1000 genomes]
rs7828670	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3423089	chr8:49351999-49356297	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49343800-49354000	Weak transcription	Fetal Intestine Small	intestine
2	chr8:49345000-49352400	Weak transcription	Brain Cingulate Gyrus	brain
3	chr8:49346400-49352400	Weak transcription	Adipose Nuclei	Adipose
4	chr8:49347800-49352400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr8:49350200-49353600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr8:49350800-49353200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr8:49350800-49353400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr8:49350800-49353600	Enhancers	Fetal Muscle Leg	muscle
9	chr8:49351200-49353600	Enhancers	Lung	lung
10	chr8:49351200-49354000	Enhancers	Fetal Lung	lung
11	chr8:49351400-49353600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr8:49351400-49353600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr8:49351400-49353800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr8:49351600-49353000	Weak transcription	Spleen	Spleen
15	chr8:49351600-49353200	Enhancers	Osteobl	bone
16	chr8:49351600-49353600	Enhancers	NHLF	lung
17	chr8:49351600-49363000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr8:49351800-49353200	Enhancers	NH-A	brain
19	chr8:49351800-49353400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr8:49351800-49353600	Enhancers	Fetal Muscle Trunk	muscle
21	chr8:49351800-49354000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr8:49352000-49352800	Weak transcription	Fetal Stomach	stomach
23	chr8:49352000-49352800	Weak transcription	Skeletal Muscle Male	skeletal muscle
24	chr8:49352200-49352400	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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