Variant report

Variant rs16954200
Chromosome Location chr17:46314563-46314564
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46266800-46318200 Weak transcription Primary B cells from peripheral blood blood
2 chr17:46294000-46318000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr17:46302600-46315800 Weak transcription GM12878-XiMat blood
4 chr17:46305200-46317600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr17:46306600-46335400 Weak transcription Thymus Thymus
6 chr17:46309200-46314600 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr17:46310200-46315800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr17:46312400-46315400 Enhancers NHEK skin
9 chr17:46312800-46315200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr17:46312800-46315400 Enhancers HMEC breast
11 chr17:46312800-46318800 Enhancers HUVEC blood vessel
12 chr17:46313000-46315400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr17:46313000-46315400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr17:46313000-46318000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr17:46313200-46314600 Weak transcription Primary T cells from cord blood blood
16 chr17:46313400-46316400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr17:46313400-46316400 Weak transcription Primary T cells fromperipheralblood blood
18 chr17:46313800-46315000 Enhancers NH-A brain
19 chr17:46313800-46315400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr17:46314000-46314600 Enhancers K562 blood
21 chr17:46314000-46315000 Enhancers Primary T killer memory cells from peripheral blood blood
22 chr17:46314000-46315000 Enhancers Muscle Satellite Cultured Cells --
23 chr17:46314000-46315000 Flanking Active TSS A549 lung
24 chr17:46314000-46315000 Enhancers Hela-S3 cervix
25 chr17:46314000-46315200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
26 chr17:46314000-46315200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr17:46314000-46315200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr17:46314000-46315400 Enhancers Primary T helper cells PMA-I stimulated --
29 chr17:46314000-46315400 Enhancers HSMM muscle
30 chr17:46314000-46315400 Enhancers Osteobl bone
31 chr17:46314000-46318000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr17:46314000-46318200 Enhancers NHDF-Ad bronchial
33 chr17:46314200-46315200 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr17:46314200-46315600 Enhancers Primary T helper naive cells fromperipheralblood blood
35 chr17:46314200-46320200 Enhancers Primary T killer naive cells fromperipheralblood blood
36 chr17:46314400-46315000 Enhancers Primary T regulatory cells fromperipheralblood blood
37 chr17:46314400-46315200 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr17:46314400-46315200 Enhancers Primary T helper 17 cells PMA-I stimulated --

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