Variant report

Variant	rs7210852
Chromosome Location	chr17:46459311-46459312
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs12326027	1.00[ASN][1000 genomes]
rs16954200	1.00[CEU][hapmap]
rs16954937	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16955293	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16955495	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16956835	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs28566062	1.00[ASN][1000 genomes]
rs2924252	1.00[CEU][hapmap]
rs6504258	1.00[ASN][1000 genomes]
rs7214998	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7225430	1.00[CEU][hapmap]
rs8073595	1.00[ASN][1000 genomes]
rs8074754	1.00[ASN][1000 genomes]
rs8074951	1.00[ASN][1000 genomes]
rs9303545	1.00[ASN][1000 genomes]
rs9891014	1.00[ASN][1000 genomes]
rs9895188	1.00[ASN][1000 genomes]
rs9908054	1.00[ASN][1000 genomes]
rs9911434	1.00[ASN][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:46438400-46471800	Weak transcription	Thymus	Thymus
2	chr17:46450800-46462000	Weak transcription	Primary hematopoietic stem cells	blood
3	chr17:46452200-46463800	Weak transcription	Primary B cells from cord blood	blood
4	chr17:46452400-46459600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr17:46452400-46460200	Weak transcription	GM12878-XiMat	blood
6	chr17:46452400-46463200	Strong transcription	Primary T cells from cord blood	blood
7	chr17:46454400-46459800	Weak transcription	Fetal Thymus	thymus
8	chr17:46454400-46460600	Weak transcription	K562	blood
9	chr17:46454600-46459800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
10	chr17:46454600-46461800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr17:46456400-46459800	Weak transcription	Primary B cells from peripheral blood	blood
12	chr17:46456400-46460000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
13	chr17:46456400-46461600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
14	chr17:46456600-46462800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
15	chr17:46456800-46459800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
16	chr17:46457400-46460600	Strong transcription	Primary T helper cells fromperipheralblood	blood
17	chr17:46457400-46461800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
18	chr17:46457600-46463200	Strong transcription	Primary T cells fromperipheralblood	blood
19	chr17:46457600-46464800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
20	chr17:46458000-46460400	Strong transcription	Primary T helper memory cells from peripheral blood 1	blood
21	chr17:46458400-46459400	Enhancers	Primary T helper cells PMA-I stimulated	--
22	chr17:46458800-46459800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
23	chr17:46459000-46460400	Strong transcription	Primary T helper memory cells from peripheral blood 2	blood

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