The 2.0 version of rSNPBase

Variant report

Variant rs16963638
Chromosome Location chr15:50621773-50621774
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:50580800-50638400 Weak transcription NHEK skin
2 chr15:50596400-50623400 Weak transcription Aorta Aorta
3 chr15:50597000-50628600 Weak transcription Fetal Stomach stomach
4 chr15:50600800-50623200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr15:50600800-50629400 Weak transcription Placenta Placenta
6 chr15:50600800-50631200 Weak transcription Left Ventricle heart
7 chr15:50600800-50635400 Weak transcription HepG2 liver
8 chr15:50600800-50641400 Weak transcription HSMM muscle
9 chr15:50600800-50641600 Weak transcription Fetal Kidney kidney
10 chr15:50600800-50643000 Weak transcription Fetal Thymus thymus
11 chr15:50600800-50643400 Weak transcription Fetal Muscle Leg muscle
12 chr15:50600800-50644200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr15:50600800-50644600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr15:50601000-50622800 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr15:50601000-50627200 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr15:50601000-50630400 Weak transcription Primary B cells from peripheral blood blood
17 chr15:50601000-50637000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr15:50601000-50638400 Weak transcription HUVEC blood vessel
19 chr15:50601400-50642800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr15:50602200-50625600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr15:50608600-50623200 Weak transcription A549 lung
22 chr15:50608800-50642800 Weak transcription Hela-S3 cervix
23 chr15:50611200-50640400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr15:50611200-50641200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr15:50611400-50626800 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr15:50611400-50641200 Weak transcription Primary T cells from cord blood blood
27 chr15:50611600-50626800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr15:50611600-50630600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr15:50611600-50640000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr15:50611800-50623200 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr15:50611800-50630800 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr15:50612400-50628400 Weak transcription Fetal Intestine Small intestine
33 chr15:50613400-50622800 Weak transcription H1 Cell Line embryonic stem cell
34 chr15:50613600-50622600 Weak transcription Primary B cells from cord blood blood
35 chr15:50613600-50633800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr15:50613800-50622600 Weak transcription Primary hematopoietic stem cells blood
37 chr15:50613800-50623000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr15:50614400-50640800 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr15:50615200-50644000 Weak transcription HSMMtube muscle
40 chr15:50615800-50640000 Weak transcription Primary T cells fromperipheralblood blood
41 chr15:50617800-50639200 Weak transcription Ovary ovary
42 chr15:50618200-50629000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr15:50618200-50642400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr15:50618400-50646000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr15:50618800-50623200 Weak transcription H9 Cell Line embryonic stem cell
46 chr15:50618800-50627000 Weak transcription Primary monocytes fromperipheralblood blood
47 chr15:50619600-50622600 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr15:50620400-50641800 Weak transcription Adipose Nuclei Adipose
49 chr15:50621200-50635600 Weak transcription Liver Liver
50 chr15:50621200-50646000 Weak transcription Gastric stomach

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Last update: Aug 31, 2015