Variant report

Variant rs16968880
Chromosome Location chr15:77800541-77800542
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:77786400-77803800 Weak transcription Primary T cells from cord blood blood
2 chr15:77789800-77801000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr15:77794800-77800600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr15:77795400-77803000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr15:77795600-77800800 Enhancers Brain Germinal Matrix brain
6 chr15:77795800-77801400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr15:77795800-77801600 Enhancers Cortex derived primary cultured neurospheres brain
8 chr15:77796000-77801800 Enhancers Fetal Lung lung
9 chr15:77796200-77800600 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr15:77796400-77801000 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr15:77796600-77803800 Enhancers Left Ventricle heart
12 chr15:77796600-77804200 Enhancers Fetal Heart heart
13 chr15:77796800-77801600 Enhancers Esophagus oesophagus
14 chr15:77797000-77801400 Enhancers Placenta Placenta
15 chr15:77797000-77801600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr15:77797000-77801800 Enhancers Breast Myoepithelial Primary Cells Breast
17 chr15:77797000-77803200 Enhancers Lung lung
18 chr15:77797000-77803400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
19 chr15:77797000-77803800 Enhancers Fetal Adrenal Gland Adrenal Gland
20 chr15:77797200-77800800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr15:77797200-77801600 Enhancers HMEC breast
22 chr15:77797200-77802400 Enhancers HUES6 Cell Line embryonic stem cell
23 chr15:77797200-77803200 Enhancers Right Atrium heart
24 chr15:77797400-77801200 Enhancers NHEK skin
25 chr15:77797400-77801400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr15:77797400-77801600 Enhancers Pancreas Pancrea
27 chr15:77797800-77801800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr15:77798000-77801400 Enhancers Fetal Stomach stomach
29 chr15:77798000-77801600 Enhancers NH-A brain
30 chr15:77798000-77803200 Enhancers Spleen Spleen
31 chr15:77798200-77801600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr15:77798200-77801800 Enhancers Fetal Thymus thymus
33 chr15:77798200-77802600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
34 chr15:77798400-77803400 Enhancers Fetal Muscle Trunk muscle
35 chr15:77798400-77803800 Enhancers Fetal Muscle Leg muscle
36 chr15:77798600-77800800 Enhancers Small Intestine intestine
37 chr15:77798600-77801000 Enhancers Gastric stomach
38 chr15:77798600-77801000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
39 chr15:77798600-77801200 Enhancers Sigmoid Colon Sigmoid Colon
40 chr15:77798600-77801400 Enhancers HSMM muscle
41 chr15:77798600-77801600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
42 chr15:77798600-77801600 Enhancers Ovary ovary
43 chr15:77798600-77801800 Enhancers NHDF-Ad bronchial
44 chr15:77798800-77800800 Enhancers Fetal Intestine Large intestine
45 chr15:77798800-77801000 Enhancers Fetal Intestine Small intestine
46 chr15:77798800-77801400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr15:77798800-77801600 Enhancers HSMMtube muscle
48 chr15:77798800-77802400 Enhancers iPS-20b Cell Line embryonic stem cell
49 chr15:77799000-77800800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr15:77799000-77801200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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