Variant report

Variant rs16969846
Chromosome Location chr15:78729739-78729740
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:78698200-78729800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr15:78729400-78729800 Flanking Active TSS Stomach Smooth Muscle stomach
3 chr15:78729400-78730000 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr15:78729400-78730000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
5 chr15:78729400-78730000 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
6 chr15:78729400-78730000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr15:78729400-78730000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
8 chr15:78729400-78730000 Flanking Active TSS Dnd41 blood
9 chr15:78729400-78730000 Flanking Active TSS K562 blood
10 chr15:78729400-78730200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
11 chr15:78729400-78730200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
12 chr15:78729400-78730200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr15:78729400-78730800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr15:78729400-78731800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
15 chr15:78729600-78729800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr15:78729600-78729800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr15:78729600-78729800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr15:78729600-78729800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr15:78729600-78729800 Flanking Active TSS Primary T cells from cord blood blood
20 chr15:78729600-78729800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
21 chr15:78729600-78729800 Flanking Active TSS Brain Angular Gyrus brain
22 chr15:78729600-78729800 Flanking Active TSS Brain Hippocampus Middle brain
23 chr15:78729600-78729800 Flanking Active TSS Brain Inferior Temporal Lobe brain
24 chr15:78729600-78729800 Flanking Active TSS Fetal Brain Female brain
25 chr15:78729600-78729800 Enhancers Fetal Heart heart
26 chr15:78729600-78729800 Flanking Active TSS Fetal Kidney kidney
27 chr15:78729600-78729800 Flanking Active TSS Left Ventricle heart
28 chr15:78729600-78729800 Enhancers Pancreas Pancrea
29 chr15:78729600-78729800 Enhancers Rectal Mucosa Donor 31 rectum
30 chr15:78729600-78729800 Flanking Active TSS Stomach Mucosa stomach
31 chr15:78729600-78729800 Flanking Active TSS A549 lung
32 chr15:78729600-78729800 Flanking Active TSS HepG2 liver
33 chr15:78729600-78730000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
34 chr15:78729600-78730000 Flanking Active TSS HUES6 Cell Line embryonic stem cell
35 chr15:78729600-78730000 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
36 chr15:78729600-78730000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr15:78729600-78730000 Flanking Active TSS Primary B cells from cord blood blood
38 chr15:78729600-78730000 Flanking Active TSS Primary B cells from peripheral blood blood
39 chr15:78729600-78730000 Flanking Active TSS Primary T cells fromperipheralblood blood
40 chr15:78729600-78730000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
41 chr15:78729600-78730000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
42 chr15:78729600-78730000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
43 chr15:78729600-78730000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
44 chr15:78729600-78730000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
45 chr15:78729600-78730000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
46 chr15:78729600-78730000 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
47 chr15:78729600-78730000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr15:78729600-78730000 Flanking Active TSS Muscle Satellite Cultured Cells --
49 chr15:78729600-78730000 Flanking Active TSS Brain Anterior Caudate brain
50 chr15:78729600-78730000 Flanking Active TSS Brain Cingulate Gyrus brain

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