The 2.0 version of rSNPBase

Variant report

Variant rs17002356
Chromosome Location chr4:77961242-77961243
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:77929400-77961800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr4:77932200-77962000 Strong transcription Fetal Brain Female brain
3 chr4:77936200-77961800 Strong transcription Skeletal Muscle Female skeletal muscle
4 chr4:77937400-77981400 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr4:77943800-77969200 Weak transcription Stomach Mucosa stomach
6 chr4:77944000-77962800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr4:77944200-77983200 Weak transcription Small Intestine intestine
8 chr4:77944400-77965400 Weak transcription Fetal Heart heart
9 chr4:77945000-77962600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr4:77945000-77962800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr4:77945600-77962600 Strong transcription Fetal Muscle Leg muscle
12 chr4:77946000-77965000 Weak transcription Esophagus oesophagus
13 chr4:77946000-77971800 Strong transcription Fetal Muscle Trunk muscle
14 chr4:77948800-77965400 Weak transcription Psoas Muscle Psoas
15 chr4:77949600-77962000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr4:77950200-77969200 Weak transcription Thymus Thymus
17 chr4:77950600-77969400 Weak transcription Right Ventricle heart
18 chr4:77951800-77969400 Weak transcription Spleen Spleen
19 chr4:77952200-77961800 Weak transcription Fetal Intestine Small intestine
20 chr4:77952800-77962600 Genic enhancers NHDF-Ad bronchial
21 chr4:77953000-77961800 Weak transcription Primary B cells from peripheral blood blood
22 chr4:77953000-77965400 Weak transcription Colon Smooth Muscle Colon
23 chr4:77953000-77969200 Weak transcription Brain Hippocampus Middle brain
24 chr4:77953000-77973400 Weak transcription Aorta Aorta
25 chr4:77953400-77967800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr4:77953600-77964200 Weak transcription HepG2 liver
27 chr4:77953800-77965400 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr4:77953800-77967200 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr4:77953800-77969000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr4:77953800-77969000 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr4:77953800-77973400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr4:77954000-77965400 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr4:77954000-77965400 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr4:77954000-77965400 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr4:77954800-77975600 Weak transcription Fetal Brain Male brain
36 chr4:77955000-77969200 Weak transcription H9 Cell Line embryonic stem cell
37 chr4:77955200-77962200 Genic enhancers HSMM muscle
38 chr4:77955200-77969200 Weak transcription Brain Angular Gyrus brain
39 chr4:77955200-77969400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr4:77956200-77978600 Weak transcription Colonic Mucosa Colon
41 chr4:77956400-77967200 Weak transcription Primary T cells fromperipheralblood blood
42 chr4:77956400-77967400 Weak transcription A549 lung
43 chr4:77956600-77961400 Weak transcription iPS-18 Cell Line embryonic stem cell
44 chr4:77956800-77961400 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr4:77956800-77966000 Weak transcription Primary B cells from cord blood blood
46 chr4:77957000-77965000 Weak transcription Rectal Smooth Muscle rectum
47 chr4:77957000-77968600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr4:77957000-77968800 Weak transcription H1 Cell Line embryonic stem cell
49 chr4:77957000-77969200 Weak transcription Brain Substantia Nigra brain
50 chr4:77957000-77993600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015