The 2.0 version of rSNPBase

Variant report

Variant rs17002354
Chromosome Location chr4:77960742-77960743
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:77928200-77960800 Strong transcription Fetal Intestine Large intestine
2 chr4:77929400-77961800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr4:77932200-77962000 Strong transcription Fetal Brain Female brain
4 chr4:77935800-77960800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr4:77936200-77961800 Strong transcription Skeletal Muscle Female skeletal muscle
6 chr4:77937400-77981400 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr4:77939800-77960800 Strong transcription Primary hematopoietic stem cells short term culture blood
8 chr4:77942800-77961000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr4:77943800-77969200 Weak transcription Stomach Mucosa stomach
10 chr4:77944000-77962800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr4:77944200-77961200 Strong transcription Placenta Placenta
12 chr4:77944200-77983200 Weak transcription Small Intestine intestine
13 chr4:77944400-77960800 Strong transcription Fetal Adrenal Gland Adrenal Gland
14 chr4:77944400-77965400 Weak transcription Fetal Heart heart
15 chr4:77945000-77962600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr4:77945000-77962800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr4:77945400-77960800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr4:77945600-77962600 Strong transcription Fetal Muscle Leg muscle
19 chr4:77946000-77965000 Weak transcription Esophagus oesophagus
20 chr4:77946000-77971800 Strong transcription Fetal Muscle Trunk muscle
21 chr4:77947800-77960800 Strong transcription GM12878-XiMat blood
22 chr4:77948800-77965400 Weak transcription Psoas Muscle Psoas
23 chr4:77949600-77962000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr4:77950200-77969200 Weak transcription Thymus Thymus
25 chr4:77950600-77969400 Weak transcription Right Ventricle heart
26 chr4:77951800-77969400 Weak transcription Spleen Spleen
27 chr4:77952200-77961800 Weak transcription Fetal Intestine Small intestine
28 chr4:77952800-77962600 Genic enhancers NHDF-Ad bronchial
29 chr4:77953000-77961800 Weak transcription Primary B cells from peripheral blood blood
30 chr4:77953000-77965400 Weak transcription Colon Smooth Muscle Colon
31 chr4:77953000-77969200 Weak transcription Brain Hippocampus Middle brain
32 chr4:77953000-77973400 Weak transcription Aorta Aorta
33 chr4:77953400-77967800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr4:77953600-77964200 Weak transcription HepG2 liver
35 chr4:77953800-77965400 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr4:77953800-77967200 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr4:77953800-77969000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr4:77953800-77969000 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr4:77953800-77973400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr4:77954000-77965400 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr4:77954000-77965400 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr4:77954000-77965400 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr4:77954800-77975600 Weak transcription Fetal Brain Male brain
44 chr4:77955000-77960800 Weak transcription Primary monocytes fromperipheralblood blood
45 chr4:77955000-77969200 Weak transcription H9 Cell Line embryonic stem cell
46 chr4:77955200-77962200 Genic enhancers HSMM muscle
47 chr4:77955200-77969200 Weak transcription Brain Angular Gyrus brain
48 chr4:77955200-77969400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr4:77956200-77978600 Weak transcription Colonic Mucosa Colon
50 chr4:77956400-77967200 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015