The 2.0 version of rSNPBase

Variant report

Variant rs4252859
Chromosome Location chr4:77981321-77981322
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:77937400-77981400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr4:77944200-77983200 Weak transcription Small Intestine intestine
3 chr4:77957000-77993600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr4:77957000-77994200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr4:77960400-77983000 Weak transcription Gastric stomach
6 chr4:77963800-77981800 Strong transcription GM12878-XiMat blood
7 chr4:77964600-77989000 Strong transcription Fetal Thymus thymus
8 chr4:77965800-77981600 Weak transcription Right Atrium heart
9 chr4:77966000-77981400 Strong transcription Primary B cells from cord blood blood
10 chr4:77966200-77988600 Strong transcription Primary neutrophils fromperipheralblood blood
11 chr4:77966400-77987600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr4:77966600-77992800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr4:77966800-77988600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
14 chr4:77967000-77988600 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr4:77967200-77985600 Strong transcription NH-A brain
16 chr4:77967200-77987600 Strong transcription HUES6 Cell Line embryonic stem cell
17 chr4:77967200-77987600 Strong transcription HUES64 Cell Line embryonic stem cell
18 chr4:77967200-77987600 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr4:77967200-77987600 Strong transcription Primary T helper cells fromperipheralblood blood
20 chr4:77967200-77987600 Strong transcription Placenta Placenta
21 chr4:77967200-77988200 Strong transcription Primary monocytes fromperipheralblood blood
22 chr4:77967200-77988600 Strong transcription Primary T cells fromperipheralblood blood
23 chr4:77967200-77988600 Strong transcription Dnd41 blood
24 chr4:77967200-77988800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr4:77967200-77989200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr4:77967200-77989200 Strong transcription Primary B cells from peripheral blood blood
27 chr4:77967200-77989600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr4:77967200-77993200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr4:77967400-77988800 Strong transcription iPS-20b Cell Line embryonic stem cell
30 chr4:77967400-77990400 Strong transcription Primary hematopoietic stem cells short term culture blood
31 chr4:77967600-77988200 Strong transcription HUES48 Cell Line embryonic stem cell
32 chr4:77967800-77987800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr4:77968400-77985000 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr4:77969000-77987800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
35 chr4:77969800-77994400 Weak transcription Stomach Mucosa stomach
36 chr4:77970000-77983000 Weak transcription Esophagus oesophagus
37 chr4:77970000-77984800 Weak transcription Right Ventricle heart
38 chr4:77970000-77988600 Weak transcription Pancreas Pancrea
39 chr4:77970400-77994800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr4:77970800-77983000 Weak transcription Spleen Spleen
41 chr4:77971000-77987600 Strong transcription iPS-18 Cell Line embryonic stem cell
42 chr4:77972400-77987000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr4:77972600-77989600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr4:77973800-77994400 Weak transcription Placenta Amnion Placenta Amnion
45 chr4:77974000-77981400 Weak transcription Thymus Thymus
46 chr4:77974000-77983200 Weak transcription Aorta Aorta
47 chr4:77974000-77984600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr4:77974000-77994800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr4:77974200-77985200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr4:77974400-77987600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015