Variant report

Variant rs17004553
Chromosome Location chr21:44872454-44872455
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:44856800-44873200 Enhancers Placenta Placenta
2 chr21:44859400-44883600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr21:44863400-44877200 Weak transcription Right Atrium heart
4 chr21:44865000-44873800 Weak transcription GM12878-XiMat blood
5 chr21:44866200-44873400 Bivalent Enhancer Fetal Muscle Trunk muscle
6 chr21:44867000-44881000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr21:44868400-44876000 Weak transcription Left Ventricle heart
8 chr21:44868600-44878400 Enhancers Fetal Brain Male brain
9 chr21:44869000-44873200 Weak transcription Primary hematopoietic stem cells blood
10 chr21:44869200-44874200 Enhancers Fetal Brain Female brain
11 chr21:44869600-44873200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr21:44869600-44873200 Enhancers Fetal Lung lung
13 chr21:44869600-44873200 Bivalent Enhancer Fetal Muscle Leg muscle
14 chr21:44869800-44873000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr21:44869800-44873000 Enhancers Esophagus oesophagus
16 chr21:44869800-44873400 Enhancers HMEC breast
17 chr21:44870000-44873000 Enhancers NHEK skin
18 chr21:44870400-44876200 Weak transcription Fetal Intestine Small intestine
19 chr21:44870800-44872600 Enhancers Placenta Amnion Placenta Amnion
20 chr21:44870800-44873800 Weak transcription Thymus Thymus
21 chr21:44870800-44880600 Weak transcription HepG2 liver
22 chr21:44871000-44872800 Weak transcription Right Ventricle heart
23 chr21:44871000-44873000 Enhancers NH-A brain
24 chr21:44871000-44882800 Weak transcription Brain Germinal Matrix brain
25 chr21:44871400-44873200 Weak transcription Stomach Mucosa stomach
26 chr21:44871400-44873200 Enhancers A549 lung
27 chr21:44871400-44874800 Weak transcription Lung lung
28 chr21:44871400-44875400 Weak transcription Fetal Heart heart
29 chr21:44871600-44873200 Enhancers HSMMtube muscle
30 chr21:44871800-44875800 Enhancers HSMM muscle
31 chr21:44872200-44872600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
32 chr21:44872200-44873400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr21:44872200-44873800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr21:44872200-44873800 Weak transcription Fetal Thymus thymus
35 chr21:44872200-44875800 Weak transcription Muscle Satellite Cultured Cells --
36 chr21:44872400-44872600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr21:44872400-44873000 Enhancers Fetal Stomach stomach
38 chr21:44872400-44873200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
39 chr21:44872400-44873800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr21:44872400-44874000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr21:44872400-44874200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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