Variant report

Variant rs17004776
Chromosome Location chr21:46888652-46888653
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46881400-46889600 Weak transcription HUVEC blood vessel
2 chr21:46882000-46889200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr21:46882400-46888800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr21:46882800-46899000 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr21:46883400-46889000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr21:46883400-46889200 Weak transcription Gastric stomach
7 chr21:46885400-46889200 Weak transcription Fetal Intestine Small intestine
8 chr21:46885400-46894400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr21:46885600-46890000 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
10 chr21:46885600-46891000 Weak transcription GM12878-XiMat blood
11 chr21:46886000-46889400 Weak transcription Duodenum Mucosa Duodenum
12 chr21:46886000-46889600 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr21:46886000-46891800 Weak transcription Fetal Heart heart
14 chr21:46886000-46893200 Enhancers Brain Hippocampus Middle brain
15 chr21:46886200-46890400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
16 chr21:46886600-46889600 Strong transcription H1 Cell Line embryonic stem cell
17 chr21:46886600-46890200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
18 chr21:46886600-46890400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr21:46886800-46889200 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
20 chr21:46887000-46889600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr21:46887000-46890000 Strong transcription HUES6 Cell Line embryonic stem cell
22 chr21:46887200-46888800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr21:46887200-46889400 Weak transcription NHDF-Ad bronchial
24 chr21:46887400-46889600 Weak transcription Osteobl bone
25 chr21:46887400-46889800 Weak transcription HSMMtube muscle
26 chr21:46887600-46889000 Weak transcription A549 lung
27 chr21:46887600-46889200 Weak transcription Brain Angular Gyrus brain
28 chr21:46887600-46889200 Weak transcription Brain Anterior Caudate brain
29 chr21:46887600-46889400 Strong transcription iPS-15b Cell Line embryonic stem cell
30 chr21:46887600-46889600 Weak transcription Muscle Satellite Cultured Cells --
31 chr21:46887600-46889600 Weak transcription NH-A brain
32 chr21:46887600-46889800 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
33 chr21:46887600-46889800 Weak transcription Esophagus oesophagus
34 chr21:46887800-46889200 Weak transcription Brain Inferior Temporal Lobe brain
35 chr21:46887800-46889200 Strong transcription Right Ventricle heart
36 chr21:46887800-46889600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr21:46887800-46889600 Weak transcription HMEC breast
38 chr21:46887800-46890000 Strong transcription HUES48 Cell Line embryonic stem cell
39 chr21:46887800-46890200 Strong transcription iPS-20b Cell Line embryonic stem cell
40 chr21:46888000-46888800 Weak transcription Stomach Smooth Muscle stomach
41 chr21:46888000-46889000 Weak transcription Brain Substantia Nigra brain
42 chr21:46888000-46889000 Strong transcription Pancreas Pancrea
43 chr21:46888000-46889200 Strong transcription Fetal Muscle Leg muscle
44 chr21:46888000-46889400 Strong transcription Spleen Spleen
45 chr21:46888000-46889400 Weak transcription HSMM muscle
46 chr21:46888000-46889600 Strong transcription NHEK skin
47 chr21:46888200-46889000 Strong transcription Duodenum Smooth Muscle Duodenum
48 chr21:46888200-46889000 Strong transcription Fetal Stomach stomach
49 chr21:46888200-46889200 Strong transcription Ovary ovary
50 chr21:46888200-46889400 Strong transcription NHLF lung

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