Variant report

Variant rs58345580
Chromosome Location chr21:46890224-46890225
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46882800-46899000 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr21:46885400-46894400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr21:46885600-46891000 Weak transcription GM12878-XiMat blood
4 chr21:46886000-46891800 Weak transcription Fetal Heart heart
5 chr21:46886000-46893200 Enhancers Brain Hippocampus Middle brain
6 chr21:46886200-46890400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
7 chr21:46886600-46890400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr21:46888600-46890800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr21:46888600-46892600 Weak transcription H9 Cell Line embryonic stem cell
10 chr21:46888800-46891800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr21:46888800-46893400 Enhancers Brain Cingulate Gyrus brain
12 chr21:46889000-46892000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr21:46889000-46892800 Enhancers Fetal Intestine Large intestine
14 chr21:46889000-46893200 Enhancers Brain Substantia Nigra brain
15 chr21:46889200-46890600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr21:46889200-46891400 Enhancers Fetal Lung lung
17 chr21:46889200-46891400 Enhancers Fetal Stomach stomach
18 chr21:46889200-46891600 Enhancers Gastric stomach
19 chr21:46889200-46892000 Enhancers Brain Angular Gyrus brain
20 chr21:46889200-46892400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr21:46889200-46893000 Enhancers Brain Inferior Temporal Lobe brain
22 chr21:46889200-46893200 Enhancers Brain Anterior Caudate brain
23 chr21:46889400-46890600 Weak transcription Left Ventricle heart
24 chr21:46889400-46890800 Weak transcription Aorta Aorta
25 chr21:46889400-46890800 Flanking Active TSS Liver Liver
26 chr21:46889400-46890800 Weak transcription Spleen Spleen
27 chr21:46889400-46891200 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr21:46889400-46891200 Enhancers Skeletal Muscle Male skeletal muscle
29 chr21:46889400-46891400 Enhancers Duodenum Mucosa Duodenum
30 chr21:46889400-46891400 Enhancers NHDF-Ad bronchial
31 chr21:46889400-46892200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr21:46889600-46890600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr21:46889600-46890800 Weak transcription H1 Cell Line embryonic stem cell
34 chr21:46889600-46890800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr21:46889600-46890800 Enhancers Muscle Satellite Cultured Cells --
36 chr21:46889600-46890800 Weak transcription Ovary ovary
37 chr21:46889600-46890800 Enhancers HMEC breast
38 chr21:46889600-46890800 Enhancers NHLF lung
39 chr21:46889600-46890800 Enhancers Osteobl bone
40 chr21:46889600-46891200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr21:46889600-46891400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr21:46889600-46891400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
43 chr21:46889600-46891400 Enhancers Fetal Intestine Small intestine
44 chr21:46889600-46891400 Enhancers Rectal Smooth Muscle rectum
45 chr21:46889600-46891400 Enhancers NH-A brain
46 chr21:46889600-46891800 Enhancers Fetal Muscle Leg muscle
47 chr21:46889600-46891800 Weak transcription Small Intestine intestine
48 chr21:46889600-46892000 Enhancers Skeletal Muscle Female skeletal muscle
49 chr21:46889800-46890600 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr21:46889800-46890800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

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