Variant report

Variant rs17004786
Chromosome Location chr21:46933164-46933165
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46898200-46939600 Weak transcription Placenta Amnion Placenta Amnion
2 chr21:46898200-46945000 Weak transcription Right Atrium heart
3 chr21:46898400-46937200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr21:46899600-46940400 Weak transcription Rectal Smooth Muscle rectum
5 chr21:46906000-46936600 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr21:46910600-46933400 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr21:46911200-46938200 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr21:46916000-46938200 Weak transcription Fetal Heart heart
9 chr21:46916000-46939600 Weak transcription Fetal Kidney kidney
10 chr21:46916200-46933400 Weak transcription HSMMtube muscle
11 chr21:46917200-46933200 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr21:46917200-46933800 Weak transcription Brain Inferior Temporal Lobe brain
13 chr21:46918200-46938400 Weak transcription Brain Hippocampus Middle brain
14 chr21:46918800-46937200 Weak transcription HUVEC blood vessel
15 chr21:46919200-46933200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr21:46919200-46934600 Weak transcription Colon Smooth Muscle Colon
17 chr21:46919400-46945000 Weak transcription Left Ventricle heart
18 chr21:46919600-46933200 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr21:46920200-46946800 Weak transcription NHEK skin
20 chr21:46922800-46937800 Weak transcription GM12878-XiMat blood
21 chr21:46923600-46933600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr21:46923600-46935600 Strong transcription HUES6 Cell Line embryonic stem cell
23 chr21:46923600-46937800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr21:46926200-46938000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr21:46926600-46933600 Weak transcription Primary hematopoietic stem cells blood
26 chr21:46926600-46937200 Strong transcription Fetal Muscle Trunk muscle
27 chr21:46926800-46933600 Weak transcription Brain Anterior Caudate brain
28 chr21:46927600-46933400 Strong transcription Aorta Aorta
29 chr21:46927800-46933600 Weak transcription Stomach Smooth Muscle stomach
30 chr21:46928000-46936800 Strong transcription NHLF lung
31 chr21:46928600-46933200 Strong transcription Lung lung
32 chr21:46928600-46935600 Strong transcription Spleen Spleen
33 chr21:46928600-46937000 Strong transcription Fetal Stomach stomach
34 chr21:46928800-46935400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr21:46929000-46934800 Strong transcription HUES48 Cell Line embryonic stem cell
36 chr21:46929000-46935200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr21:46929000-46935200 Strong transcription Adipose Nuclei Adipose
38 chr21:46929200-46936800 Strong transcription H1 Cell Line embryonic stem cell
39 chr21:46929200-46937800 Weak transcription K562 blood
40 chr21:46929200-46938800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr21:46929400-46934800 Strong transcription Ovary ovary
42 chr21:46929400-46937600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr21:46929400-46946600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr21:46929600-46937200 Strong transcription Fetal Adrenal Gland Adrenal Gland
45 chr21:46929600-46937400 Strong transcription Fetal Muscle Leg muscle
46 chr21:46930000-46937800 Strong transcription Fetal Intestine Small intestine
47 chr21:46930200-46937800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr21:46930200-46937800 Strong transcription Fetal Intestine Large intestine
49 chr21:46930400-46933200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr21:46930400-46934800 Strong transcription Primary T helper naive cells fromperipheralblood blood

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