Variant report

Variant rs9917539
Chromosome Location chr21:46934240-46934241
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46898200-46939600 Weak transcription Placenta Amnion Placenta Amnion
2 chr21:46898200-46945000 Weak transcription Right Atrium heart
3 chr21:46898400-46937200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr21:46899600-46940400 Weak transcription Rectal Smooth Muscle rectum
5 chr21:46906000-46936600 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr21:46911200-46938200 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr21:46916000-46938200 Weak transcription Fetal Heart heart
8 chr21:46916000-46939600 Weak transcription Fetal Kidney kidney
9 chr21:46918200-46938400 Weak transcription Brain Hippocampus Middle brain
10 chr21:46918800-46937200 Weak transcription HUVEC blood vessel
11 chr21:46919200-46934600 Weak transcription Colon Smooth Muscle Colon
12 chr21:46919400-46945000 Weak transcription Left Ventricle heart
13 chr21:46920200-46946800 Weak transcription NHEK skin
14 chr21:46922800-46937800 Weak transcription GM12878-XiMat blood
15 chr21:46923600-46935600 Strong transcription HUES6 Cell Line embryonic stem cell
16 chr21:46923600-46937800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr21:46926200-46938000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr21:46926600-46937200 Strong transcription Fetal Muscle Trunk muscle
19 chr21:46928000-46936800 Strong transcription NHLF lung
20 chr21:46928600-46935600 Strong transcription Spleen Spleen
21 chr21:46928600-46937000 Strong transcription Fetal Stomach stomach
22 chr21:46928800-46935400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr21:46929000-46934800 Strong transcription HUES48 Cell Line embryonic stem cell
24 chr21:46929000-46935200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr21:46929000-46935200 Strong transcription Adipose Nuclei Adipose
26 chr21:46929200-46936800 Strong transcription H1 Cell Line embryonic stem cell
27 chr21:46929200-46937800 Weak transcription K562 blood
28 chr21:46929200-46938800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr21:46929400-46934800 Strong transcription Ovary ovary
30 chr21:46929400-46937600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr21:46929400-46946600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr21:46929600-46937200 Strong transcription Fetal Adrenal Gland Adrenal Gland
33 chr21:46929600-46937400 Strong transcription Fetal Muscle Leg muscle
34 chr21:46930000-46937800 Strong transcription Fetal Intestine Small intestine
35 chr21:46930200-46937800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr21:46930200-46937800 Strong transcription Fetal Intestine Large intestine
37 chr21:46930400-46934800 Strong transcription Primary T helper naive cells fromperipheralblood blood
38 chr21:46930400-46937400 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr21:46930400-46937400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr21:46930400-46937400 Strong transcription HepG2 liver
41 chr21:46930600-46937600 Strong transcription Fetal Thymus thymus
42 chr21:46931000-46937000 Strong transcription Thymus Thymus
43 chr21:46931200-46936800 Strong transcription Duodenum Mucosa Duodenum
44 chr21:46931200-46937800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr21:46931200-46938000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr21:46931400-46936600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
47 chr21:46931400-46936600 Strong transcription Primary monocytes fromperipheralblood blood
48 chr21:46931400-46937400 Strong transcription Brain Germinal Matrix brain
49 chr21:46931600-46934400 Weak transcription Primary B cells from peripheral blood blood
50 chr21:46931600-46936400 Genic enhancers Primary neutrophils fromperipheralblood blood

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