Variant report

Variant rs17006709
Chromosome Location chr3:20227197-20227198
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:20224600-20229000 Active TSS GM12878-XiMat blood
2 chr3:20225800-20227200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
3 chr3:20225800-20228600 Active TSS HUES64 Cell Line embryonic stem cell
4 chr3:20225800-20228600 Active TSS K562 blood
5 chr3:20225800-20228800 Active TSS HMEC breast
6 chr3:20225800-20229000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
7 chr3:20226000-20227200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
8 chr3:20226000-20228600 Active TSS H1 Cell Line embryonic stem cell
9 chr3:20226000-20228600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr3:20226000-20228600 Active TSS Thymus Thymus
11 chr3:20226000-20228800 Active TSS NHDF-Ad bronchial
12 chr3:20226000-20229000 Active TSS ES-I3 Cell Line embryonic stem cell
13 chr3:20226000-20229000 Active TSS HUES48 Cell Line embryonic stem cell
14 chr3:20226000-20229000 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
15 chr3:20226200-20227200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr3:20226200-20228800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr3:20226200-20228800 Active TSS NHEK skin
18 chr3:20226200-20229000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr3:20226200-20229200 Active TSS HUES6 Cell Line embryonic stem cell
20 chr3:20226200-20229200 Active TSS NHLF lung
21 chr3:20226400-20227200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr3:20226400-20227200 Flanking Active TSS Muscle Satellite Cultured Cells --
23 chr3:20226400-20227400 Flanking Active TSS Primary B cells from cord blood blood
24 chr3:20226400-20227400 Flanking Active TSS Primary hematopoietic stem cells blood
25 chr3:20226400-20227400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
26 chr3:20226400-20228200 Active TSS HSMM muscle
27 chr3:20226400-20228600 Active TSS ES-UCSF4 Cell Line embryonic stem cell
28 chr3:20226400-20228600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr3:20226400-20228600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
30 chr3:20226400-20228800 Active TSS Fetal Stomach stomach
31 chr3:20226400-20229000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr3:20226400-20229000 Active TSS Fetal Intestine Large intestine
33 chr3:20226400-20229200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr3:20226600-20227400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr3:20226600-20227400 Flanking Active TSS Brain Germinal Matrix brain
36 chr3:20226600-20227600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
37 chr3:20226600-20228200 Active TSS Fetal Muscle Leg muscle
38 chr3:20226600-20228400 Active TSS Placenta Amnion Placenta Amnion
39 chr3:20226600-20228600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr3:20226600-20228600 Active TSS iPS-15b Cell Line embryonic stem cell
41 chr3:20226600-20228600 Active TSS iPS-18 Cell Line embryonic stem cell
42 chr3:20226600-20228800 Active TSS ES-WA7 Cell Line embryonic stem cell
43 chr3:20226600-20228800 Active TSS A549 lung
44 chr3:20226600-20229000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr3:20226600-20229000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
46 chr3:20226600-20229600 Active TSS iPS-20b Cell Line embryonic stem cell
47 chr3:20226800-20227200 Flanking Active TSS Primary B cells from peripheral blood blood
48 chr3:20226800-20227200 Enhancers Brain Substantia Nigra brain
49 chr3:20226800-20227200 Flanking Active TSS Duodenum Smooth Muscle Duodenum
50 chr3:20226800-20227400 Flanking Active TSS Primary monocytes fromperipheralblood blood

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