The 2.0 version of rSNPBase

Variant report

Variant rs17008479
Chromosome Location chr4:125601295-125601296
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:125590600-125605600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr4:125592400-125611400 Weak transcription HepG2 liver
3 chr4:125593000-125601400 Weak transcription Spleen Spleen
4 chr4:125593000-125605600 Weak transcription Placenta Amnion Placenta Amnion
5 chr4:125593000-125606200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr4:125593000-125608400 Weak transcription Pancreas Pancrea
7 chr4:125593000-125618200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr4:125593000-125621800 Weak transcription Fetal Stomach stomach
9 chr4:125593000-125631200 Weak transcription Esophagus oesophagus
10 chr4:125593200-125602200 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr4:125593200-125605600 Weak transcription Rectal Smooth Muscle rectum
12 chr4:125593200-125606000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr4:125593200-125607400 Weak transcription Gastric stomach
14 chr4:125593200-125607800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr4:125593200-125608800 Weak transcription Colonic Mucosa Colon
16 chr4:125593200-125609000 Weak transcription Brain Germinal Matrix brain
17 chr4:125593400-125605200 Weak transcription Fetal Brain Male brain
18 chr4:125593400-125605600 Weak transcription Primary hematopoietic stem cells blood
19 chr4:125593400-125605600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr4:125593400-125605600 Weak transcription K562 blood
21 chr4:125593400-125606800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr4:125593400-125607400 Weak transcription Lung lung
23 chr4:125593400-125621800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr4:125593400-125629800 Weak transcription Aorta Aorta
25 chr4:125593400-125629800 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr4:125593400-125631200 Weak transcription Thymus Thymus
27 chr4:125593600-125601400 Weak transcription Brain Anterior Caudate brain
28 chr4:125593600-125601400 Weak transcription Duodenum Mucosa Duodenum
29 chr4:125593600-125601800 Weak transcription Stomach Smooth Muscle stomach
30 chr4:125593600-125605400 Weak transcription Colon Smooth Muscle Colon
31 chr4:125593600-125605600 Weak transcription H1 Cell Line embryonic stem cell
32 chr4:125593600-125605600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr4:125593600-125606000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr4:125593600-125606000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr4:125593600-125606200 Weak transcription Left Ventricle heart
36 chr4:125593600-125607000 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr4:125593600-125607600 Weak transcription H9 Cell Line embryonic stem cell
38 chr4:125593600-125609800 Weak transcription Fetal Kidney kidney
39 chr4:125593600-125610400 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr4:125593600-125617400 Weak transcription Fetal Intestine Large intestine
41 chr4:125593600-125629600 Weak transcription HSMMtube muscle
42 chr4:125593600-125631000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr4:125593800-125601400 Weak transcription NHLF lung
44 chr4:125593800-125606000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr4:125593800-125610200 Weak transcription Primary T cells from cord blood blood
46 chr4:125594200-125625400 Weak transcription Hela-S3 cervix
47 chr4:125594200-125631200 Weak transcription Fetal Thymus thymus
48 chr4:125594600-125616600 Weak transcription A549 lung
49 chr4:125594800-125605200 Weak transcription NHEK skin
50 chr4:125594800-125605800 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015