The 2.0 version of rSNPBase

Variant report

Variant rs3796684
Chromosome Location chr4:125629055-125629056
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:125593000-125631200 Weak transcription Esophagus oesophagus
2 chr4:125593400-125629800 Weak transcription Aorta Aorta
3 chr4:125593400-125629800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr4:125593400-125631200 Weak transcription Thymus Thymus
5 chr4:125593600-125629600 Weak transcription HSMMtube muscle
6 chr4:125593600-125631000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr4:125594200-125631200 Weak transcription Fetal Thymus thymus
8 chr4:125597400-125631200 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr4:125606000-125631000 Weak transcription Placenta Amnion Placenta Amnion
10 chr4:125606200-125629600 Weak transcription K562 blood
11 chr4:125607800-125631200 Weak transcription Left Ventricle heart
12 chr4:125608200-125629800 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr4:125611400-125629800 Weak transcription Fetal Kidney kidney
14 chr4:125611600-125632400 Weak transcription Stomach Mucosa stomach
15 chr4:125616600-125631200 Weak transcription Lung lung
16 chr4:125616800-125629600 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr4:125616800-125631200 Weak transcription H9 Cell Line embryonic stem cell
18 chr4:125616800-125631200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr4:125617000-125630200 Weak transcription Brain Hippocampus Middle brain
20 chr4:125617800-125629600 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr4:125619200-125629600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr4:125620000-125629800 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr4:125620000-125631400 Weak transcription Brain Anterior Caudate brain
24 chr4:125620400-125630200 Weak transcription Adipose Nuclei Adipose
25 chr4:125620600-125629600 Weak transcription NHLF lung
26 chr4:125621000-125629800 Weak transcription Stomach Smooth Muscle stomach
27 chr4:125622200-125629400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr4:125622200-125629600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr4:125622200-125629800 Weak transcription Psoas Muscle Psoas
30 chr4:125622200-125630400 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr4:125622400-125629400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr4:125622400-125629600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr4:125622400-125629800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr4:125622400-125630200 Weak transcription Fetal Intestine Small intestine
35 chr4:125622400-125630400 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr4:125622400-125630400 Weak transcription Fetal Intestine Large intestine
37 chr4:125622400-125631000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr4:125622400-125632600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr4:125622600-125629800 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr4:125622600-125630200 Weak transcription A549 lung
41 chr4:125622800-125629600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr4:125622800-125629600 Weak transcription HMEC breast
43 chr4:125622800-125630200 Weak transcription Osteobl bone
44 chr4:125623000-125629400 Weak transcription Fetal Stomach stomach
45 chr4:125623000-125629600 Weak transcription H1 Cell Line embryonic stem cell
46 chr4:125623000-125629800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr4:125623000-125631200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr4:125623200-125629600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr4:125624400-125629600 Weak transcription Fetal Muscle Leg muscle
50 chr4:125624800-125629600 Weak transcription Ovary ovary

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Last update: Aug 31, 2015