Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10218478	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11118902	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12024555	0.82[EUR][1000 genomes]
rs12033415	0.80[EUR][1000 genomes]
rs12120034	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12123928	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12124556	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12125383	0.81[EUR][1000 genomes]
rs12137323	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12140498	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12140529	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12140604	0.80[EUR][1000 genomes]
rs13375176	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17011141	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17011182	0.80[EUR][1000 genomes]
rs6687758	0.81[EUR][1000 genomes]
rs6691195	0.81[EUR][1000 genomes]
rs6695584	0.81[EUR][1000 genomes]
rs72740077	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7520544	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs949618	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs17011146	RP11-815M8.1	cis	lung	GTEx

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:222095400-222117800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr1:222098000-222118800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr1:222111800-222114400	Enhancers	Primary B cells from peripheral blood	blood
4	chr1:222112000-222114400	Enhancers	Primary B cells from cord blood	blood
5	chr1:222112200-222114600	Enhancers	Fetal Brain Male	brain
6	chr1:222112200-222114600	Enhancers	GM12878-XiMat	blood
7	chr1:222112600-222113800	Enhancers	Fetal Brain Female	brain
8	chr1:222112800-222114200	Enhancers	HSMM	muscle
9	chr1:222113000-222114200	Enhancers	Dnd41	blood
10	chr1:222113200-222113800	Weak transcription	HSMMtube	muscle

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