The 2.0 version of rSNPBase

Variant report

Variant rs17017732
Chromosome Location chr4:144324543-144324544
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:144303400-144326600 Weak transcription Colonic Mucosa Colon
2 chr4:144309200-144327600 Weak transcription Esophagus oesophagus
3 chr4:144310200-144325600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr4:144312600-144326400 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr4:144312600-144328600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr4:144312800-144331400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr4:144312800-144336800 Weak transcription Fetal Muscle Trunk muscle
8 chr4:144313800-144332000 Weak transcription Placenta Amnion Placenta Amnion
9 chr4:144317400-144327600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr4:144317800-144325800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr4:144318200-144325600 Weak transcription Lung lung
12 chr4:144318200-144327600 Weak transcription K562 blood
13 chr4:144318200-144337000 Weak transcription Fetal Intestine Large intestine
14 chr4:144318200-144362400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr4:144319200-144324800 Weak transcription Stomach Smooth Muscle stomach
16 chr4:144319200-144336600 Weak transcription Fetal Kidney kidney
17 chr4:144320000-144325600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr4:144320200-144325600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr4:144320600-144328600 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr4:144320800-144326600 Weak transcription Stomach Mucosa stomach
21 chr4:144321000-144327600 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr4:144321600-144325600 Weak transcription Pancreas Pancrea
23 chr4:144321800-144330200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr4:144322200-144334000 Enhancers Fetal Heart heart
25 chr4:144323000-144326400 Enhancers Pancreatic Islets Pancreatic Islet
26 chr4:144323200-144335800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr4:144323400-144324600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr4:144323400-144324800 Enhancers Fetal Brain Female brain
29 chr4:144323400-144325000 Enhancers Fetal Brain Male brain
30 chr4:144323400-144327600 Enhancers Colon Smooth Muscle Colon
31 chr4:144323400-144328400 Enhancers Fetal Adrenal Gland Adrenal Gland
32 chr4:144323400-144330400 Enhancers HUVEC blood vessel
33 chr4:144323600-144324600 Enhancers Fetal Lung lung
34 chr4:144323600-144324800 Enhancers Breast Myoepithelial Primary Cells Breast
35 chr4:144323600-144324800 Enhancers Small Intestine intestine
36 chr4:144323600-144324800 Enhancers Spleen Spleen
37 chr4:144323600-144325000 Enhancers Left Ventricle heart
38 chr4:144323600-144325000 Enhancers Right Ventricle heart
39 chr4:144323600-144325000 Enhancers NHLF lung
40 chr4:144323600-144328000 Enhancers Duodenum Smooth Muscle Duodenum
41 chr4:144323600-144328200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
42 chr4:144323600-144328200 Enhancers Ovary ovary
43 chr4:144323600-144328600 Enhancers Liver Liver
44 chr4:144323800-144324800 Enhancers Fetal Muscle Leg muscle
45 chr4:144323800-144324800 Enhancers Fetal Stomach stomach
46 chr4:144323800-144325000 Enhancers Sigmoid Colon Sigmoid Colon
47 chr4:144324000-144324600 Enhancers HSMM muscle
48 chr4:144324000-144324800 Flanking Active TSS Adipose Nuclei Adipose
49 chr4:144324000-144324800 Flanking Active TSS HSMMtube muscle
50 chr4:144324000-144326400 Enhancers Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015