The 2.0 version of rSNPBase

Variant report

Variant rs17017760
Chromosome Location chr4:144339878-144339879
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:144318200-144362400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr4:144327800-144361200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr4:144327800-144388200 Weak transcription HepG2 liver
4 chr4:144328000-144346400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr4:144328000-144359200 Weak transcription Esophagus oesophagus
6 chr4:144328800-144340000 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr4:144329000-144359400 Weak transcription K562 blood
8 chr4:144329800-144352600 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr4:144332400-144359200 Weak transcription Pancreas Pancrea
10 chr4:144332800-144359200 Weak transcription HMEC breast
11 chr4:144333000-144346200 Weak transcription Ovary ovary
12 chr4:144333000-144346400 Weak transcription Rectal Smooth Muscle rectum
13 chr4:144333000-144358800 Weak transcription Right Ventricle heart
14 chr4:144333000-144364600 Weak transcription NHEK skin
15 chr4:144333200-144341200 Weak transcription HSMM muscle
16 chr4:144333200-144350600 Weak transcription NHDF-Ad bronchial
17 chr4:144333400-144346400 Weak transcription Gastric stomach
18 chr4:144333400-144350800 Weak transcription Fetal Brain Male brain
19 chr4:144333400-144359400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr4:144333400-144362400 Weak transcription NH-A brain
21 chr4:144333600-144342400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr4:144333600-144347800 Weak transcription Fetal Brain Female brain
23 chr4:144333600-144359800 Weak transcription HSMMtube muscle
24 chr4:144333800-144348000 Weak transcription Brain Germinal Matrix brain
25 chr4:144333800-144348600 Weak transcription Aorta Aorta
26 chr4:144333800-144350600 Weak transcription NHLF lung
27 chr4:144334000-144342400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr4:144334000-144359400 Weak transcription HUVEC blood vessel
29 chr4:144334400-144342600 Weak transcription Hela-S3 cervix
30 chr4:144336400-144340200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr4:144336400-144345400 Weak transcription Osteobl bone
32 chr4:144336400-144392200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr4:144336600-144340000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr4:144336600-144340200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr4:144336600-144340200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr4:144336600-144340200 Strong transcription Fetal Lung lung
37 chr4:144336600-144340200 Strong transcription Monocytes-CD14+_RO01746 blood
38 chr4:144336800-144340000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr4:144337000-144340200 Strong transcription Fetal Intestine Large intestine
40 chr4:144337000-144350600 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr4:144337200-144340200 Strong transcription Primary monocytes fromperipheralblood blood
42 chr4:144337800-144340600 Strong transcription Breast Myoepithelial Primary Cells Breast
43 chr4:144338200-144350400 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr4:144338400-144343600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr4:144338400-144344200 Enhancers Fetal Heart heart
46 chr4:144338400-144346400 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr4:144338600-144340200 Enhancers Primary B cells from peripheral blood blood
48 chr4:144338600-144345200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr4:144338600-144345200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr4:144338600-144346200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015