The 2.0 version of rSNPBase

Variant report

Variant rs17023166
Chromosome Location chr1:214713658-214713659
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214699200-214722000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr1:214699200-214722400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:214699800-214715200 Weak transcription Stomach Mucosa stomach
4 chr1:214701200-214719000 Weak transcription Hela-S3 cervix
5 chr1:214702800-214718800 Weak transcription Aorta Aorta
6 chr1:214706600-214713800 Weak transcription H9 Cell Line embryonic stem cell
7 chr1:214706600-214714600 Weak transcription Lung lung
8 chr1:214706600-214715600 Weak transcription Esophagus oesophagus
9 chr1:214706600-214715600 Weak transcription Fetal Muscle Trunk muscle
10 chr1:214706600-214715600 Weak transcription Fetal Muscle Leg muscle
11 chr1:214706600-214715600 Weak transcription Left Ventricle heart
12 chr1:214706600-214715600 Weak transcription Ovary ovary
13 chr1:214706600-214720000 Weak transcription Fetal Intestine Small intestine
14 chr1:214706600-214720600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:214706800-214713800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:214706800-214714600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:214706800-214715600 Weak transcription Gastric stomach
18 chr1:214706800-214715600 Weak transcription Pancreas Pancrea
19 chr1:214707000-214718200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:214710400-214716800 Enhancers Skeletal Muscle Male skeletal muscle
21 chr1:214710600-214714000 Enhancers Fetal Heart heart
22 chr1:214710600-214714200 Enhancers NHDF-Ad bronchial
23 chr1:214710800-214714200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:214710800-214714200 Enhancers Duodenum Smooth Muscle Duodenum
25 chr1:214710800-214718600 Weak transcription Right Atrium heart
26 chr1:214711000-214714000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:214711000-214715600 Weak transcription Spleen Spleen
28 chr1:214711400-214714800 Enhancers HSMM muscle
29 chr1:214711400-214714800 Enhancers Osteobl bone
30 chr1:214711600-214714800 Enhancers NHEK skin
31 chr1:214711600-214716000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr1:214711800-214716600 Enhancers Colon Smooth Muscle Colon
33 chr1:214711800-214719400 Weak transcription A549 lung
34 chr1:214712000-214719800 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr1:214712000-214721200 Weak transcription HSMMtube muscle
36 chr1:214712200-214714800 Weak transcription Fetal Stomach stomach
37 chr1:214712200-214715600 Weak transcription Adipose Nuclei Adipose
38 chr1:214712200-214719800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr1:214712400-214713800 Weak transcription Rectal Smooth Muscle rectum
40 chr1:214712600-214713800 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr1:214712600-214714400 Enhancers Muscle Satellite Cultured Cells --
42 chr1:214712800-214714000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
43 chr1:214712800-214714000 Enhancers HMEC breast
44 chr1:214712800-214714200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:214712800-214714800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:214713000-214714000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:214713000-214714200 Enhancers Fetal Kidney kidney
48 chr1:214713000-214714400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
49 chr1:214713000-214714800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr1:214713000-214715000 Enhancers Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015