The 2.0 version of rSNPBase

Variant report

Variant rs74139864
Chromosome Location chr1:214573614-214573615
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214519200-214577200 Weak transcription Primary hematopoietic stem cells blood
2 chr1:214524400-214574400 Weak transcription Brain Hippocampus Middle brain
3 chr1:214529000-214584200 Weak transcription Brain Anterior Caudate brain
4 chr1:214537600-214577000 Weak transcription Stomach Mucosa stomach
5 chr1:214546200-214576000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr1:214546200-214576200 Weak transcription Right Atrium heart
7 chr1:214547800-214576200 Weak transcription Fetal Heart heart
8 chr1:214554000-214577800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr1:214554200-214577800 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr1:214556000-214576000 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr1:214557800-214576200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:214557800-214578000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:214557800-214589000 Weak transcription Rectal Smooth Muscle rectum
14 chr1:214558000-214576600 Weak transcription Duodenum Mucosa Duodenum
15 chr1:214558000-214578200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr1:214558200-214584000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr1:214560000-214592000 Weak transcription Hela-S3 cervix
18 chr1:214560400-214576600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr1:214560600-214576000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:214560800-214576000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:214563000-214575600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:214563600-214575200 Strong transcription HUVEC blood vessel
23 chr1:214563800-214575400 Strong transcription Fetal Adrenal Gland Adrenal Gland
24 chr1:214563800-214575400 Strong transcription Fetal Muscle Trunk muscle
25 chr1:214565200-214577200 Strong transcription Fetal Muscle Leg muscle
26 chr1:214565400-214575200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:214565800-214575200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:214567000-214576800 Weak transcription Spleen Spleen
29 chr1:214567000-214587600 Weak transcription HepG2 liver
30 chr1:214567400-214573800 Weak transcription Colon Smooth Muscle Colon
31 chr1:214567400-214574000 Weak transcription Stomach Smooth Muscle stomach
32 chr1:214567400-214574200 Weak transcription Right Ventricle heart
33 chr1:214567400-214578000 Weak transcription Esophagus oesophagus
34 chr1:214567600-214576200 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr1:214567600-214584000 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr1:214567800-214574200 Weak transcription Aorta Aorta
37 chr1:214567800-214576600 Weak transcription Lung lung
38 chr1:214568200-214578200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr1:214568400-214574400 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr1:214568400-214579200 Weak transcription Gastric stomach
41 chr1:214568600-214575000 Strong transcription HSMM muscle
42 chr1:214568800-214575000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:214568800-214576000 Strong transcription NHLF lung
44 chr1:214569000-214576000 Strong transcription HMEC breast
45 chr1:214569200-214575000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr1:214569400-214574400 Weak transcription Ovary ovary
47 chr1:214569600-214574200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr1:214569800-214574400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr1:214569800-214576000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr1:214569800-214576000 Strong transcription NHEK skin

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Last update: Aug 31, 2015