The 2.0 version of rSNPBase

Variant report

Variant rs17023177
Chromosome Location chr1:214720089-214720090
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214699200-214722000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr1:214699200-214722400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:214706600-214720600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:214712000-214721200 Weak transcription HSMMtube muscle
5 chr1:214714000-214720600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:214714000-214720800 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr1:214714000-214722400 Weak transcription H1 Cell Line embryonic stem cell
8 chr1:214714000-214722400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:214714000-214722400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:214714000-214722400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:214714200-214720600 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr1:214715200-214720600 Weak transcription NHLF lung
13 chr1:214715600-214720600 Weak transcription Fetal Lung lung
14 chr1:214716000-214720600 Weak transcription Lung lung
15 chr1:214716000-214722200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr1:214716000-214722400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:214716000-214722400 Weak transcription Fetal Muscle Trunk muscle
18 chr1:214716000-214722400 Weak transcription Gastric stomach
19 chr1:214716200-214721400 Weak transcription Rectal Smooth Muscle rectum
20 chr1:214716200-214722400 Weak transcription Fetal Stomach stomach
21 chr1:214716400-214721200 Weak transcription Fetal Muscle Leg muscle
22 chr1:214716400-214721400 Weak transcription Ovary ovary
23 chr1:214716600-214720200 Weak transcription NHDF-Ad bronchial
24 chr1:214716600-214720600 Weak transcription Colon Smooth Muscle Colon
25 chr1:214716600-214722200 Weak transcription Fetal Heart heart
26 chr1:214718200-214720400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:214718200-214721800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr1:214718600-214720200 Enhancers Right Atrium heart
29 chr1:214718600-214720600 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr1:214718600-214722200 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr1:214718600-214722800 Enhancers Left Ventricle heart
32 chr1:214718600-214723400 Enhancers Stomach Mucosa stomach
33 chr1:214718800-214720200 Enhancers H9 Cell Line embryonic stem cell
34 chr1:214718800-214722400 Enhancers HUES64 Cell Line embryonic stem cell
35 chr1:214719000-214720200 Transcr. at gene 5' and 3' HMEC breast
36 chr1:214719000-214720600 Enhancers Hela-S3 cervix
37 chr1:214719000-214721200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:214719000-214721400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr1:214719000-214721400 Enhancers Skeletal Muscle Male skeletal muscle
40 chr1:214719000-214722200 Enhancers Psoas Muscle Psoas
41 chr1:214719200-214720600 Genic enhancers Osteobl bone
42 chr1:214719200-214720800 Weak transcription Dnd41 blood
43 chr1:214719200-214721000 Enhancers Pancreas Pancrea
44 chr1:214719200-214721400 Enhancers Fetal Kidney kidney
45 chr1:214719200-214721400 Weak transcription Stomach Smooth Muscle stomach
46 chr1:214719200-214721600 Transcr. at gene 5' and 3' NHEK skin
47 chr1:214719400-214720200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr1:214719400-214720600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr1:214719400-214720600 Enhancers A549 lung
50 chr1:214719400-214721000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015