Variant report

Variant rs7542891
Chromosome Location chr1:214721174-214721175
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214699200-214722000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr1:214699200-214722400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:214712000-214721200 Weak transcription HSMMtube muscle
4 chr1:214714000-214722400 Weak transcription H1 Cell Line embryonic stem cell
5 chr1:214714000-214722400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:214714000-214722400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:214714000-214722400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr1:214716000-214722200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr1:214716000-214722400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:214716000-214722400 Weak transcription Fetal Muscle Trunk muscle
11 chr1:214716000-214722400 Weak transcription Gastric stomach
12 chr1:214716200-214721400 Weak transcription Rectal Smooth Muscle rectum
13 chr1:214716200-214722400 Weak transcription Fetal Stomach stomach
14 chr1:214716400-214721200 Weak transcription Fetal Muscle Leg muscle
15 chr1:214716400-214721400 Weak transcription Ovary ovary
16 chr1:214716600-214722200 Weak transcription Fetal Heart heart
17 chr1:214718200-214721800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr1:214718600-214722200 Enhancers ES-I3 Cell Line embryonic stem cell
19 chr1:214718600-214722800 Enhancers Left Ventricle heart
20 chr1:214718600-214723400 Enhancers Stomach Mucosa stomach
21 chr1:214718800-214722400 Enhancers HUES64 Cell Line embryonic stem cell
22 chr1:214719000-214721200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:214719000-214721400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:214719000-214721400 Enhancers Skeletal Muscle Male skeletal muscle
25 chr1:214719000-214722200 Enhancers Psoas Muscle Psoas
26 chr1:214719200-214721400 Enhancers Fetal Kidney kidney
27 chr1:214719200-214721400 Weak transcription Stomach Smooth Muscle stomach
28 chr1:214719200-214721600 Transcr. at gene 5' and 3' NHEK skin
29 chr1:214719400-214721200 Enhancers iPS-20b Cell Line embryonic stem cell
30 chr1:214719600-214722200 Weak transcription Right Ventricle heart
31 chr1:214719600-214723200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
32 chr1:214719800-214721600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:214719800-214722400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:214719800-214722400 Enhancers Placenta Amnion Placenta Amnion
35 chr1:214719800-214722800 Enhancers Fetal Adrenal Gland Adrenal Gland
36 chr1:214719800-214723600 Flanking Active TSS HUVEC blood vessel
37 chr1:214720000-214721600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:214720000-214722600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr1:214720000-214722800 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr1:214720200-214721200 Weak transcription Right Atrium heart
41 chr1:214720200-214721400 Enhancers NHDF-Ad bronchial
42 chr1:214720200-214722400 Weak transcription H9 Cell Line embryonic stem cell
43 chr1:214720400-214721400 Active TSS Breast Myoepithelial Primary Cells Breast
44 chr1:214720600-214721200 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:214720600-214721200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr1:214720600-214721200 Enhancers Aorta Aorta
47 chr1:214720600-214721400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
48 chr1:214720600-214721400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
49 chr1:214720600-214721600 Enhancers ES-WA7 Cell Line embryonic stem cell
50 chr1:214720600-214721600 Transcr. at gene 5' and 3' Osteobl bone

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