The 2.0 version of rSNPBase

Variant report

Variant rs17034591
Chromosome Location chr1:10288641-10288642
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10272600-10368200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:10272800-10290000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr1:10272800-10296600 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:10276800-10311800 Weak transcription Hela-S3 cervix
5 chr1:10277000-10322000 Weak transcription Spleen Spleen
6 chr1:10278400-10291000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:10278400-10295200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:10278400-10302000 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr1:10278600-10294800 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr1:10278800-10292400 Weak transcription Fetal Muscle Leg muscle
11 chr1:10278800-10296400 Weak transcription Fetal Lung lung
12 chr1:10279800-10297800 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr1:10281000-10294800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr1:10282600-10291000 Weak transcription Fetal Brain Female brain
15 chr1:10284000-10289200 Enhancers Brain Hippocampus Middle brain
16 chr1:10284400-10289200 Enhancers Skeletal Muscle Female skeletal muscle
17 chr1:10284800-10311000 Weak transcription Small Intestine intestine
18 chr1:10285000-10289000 Enhancers Colon Smooth Muscle Colon
19 chr1:10285000-10294000 Weak transcription Fetal Stomach stomach
20 chr1:10285200-10316000 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr1:10285400-10292200 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr1:10285400-10294000 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr1:10285400-10302400 Weak transcription Primary hematopoietic stem cells blood
24 chr1:10285400-10310800 Weak transcription Aorta Aorta
25 chr1:10285400-10312600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr1:10285600-10290000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr1:10285600-10290600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:10285600-10293200 Weak transcription Fetal Muscle Trunk muscle
29 chr1:10285600-10294600 Weak transcription Lung lung
30 chr1:10285600-10295200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:10285800-10292000 Weak transcription Psoas Muscle Psoas
32 chr1:10285800-10293000 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr1:10285800-10297000 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr1:10286000-10288800 Weak transcription Brain Angular Gyrus brain
35 chr1:10286000-10292200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr1:10286000-10292200 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr1:10286000-10293600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:10286000-10298000 Weak transcription Right Atrium heart
39 chr1:10286000-10301800 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr1:10286000-10303000 Weak transcription Brain Germinal Matrix brain
41 chr1:10286200-10288800 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr1:10286200-10289000 Weak transcription Rectal Smooth Muscle rectum
43 chr1:10286200-10292400 Weak transcription NH-A brain
44 chr1:10286400-10290800 Weak transcription NHLF lung
45 chr1:10286400-10294600 Weak transcription Right Ventricle heart
46 chr1:10286400-10297000 Weak transcription HSMMtube muscle
47 chr1:10286600-10290400 Weak transcription Osteobl bone
48 chr1:10286600-10294200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:10286800-10288800 Enhancers Cortex derived primary cultured neurospheres brain
50 chr1:10286800-10301600 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015