Variant report

No data

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:110919679..110920650-chr4:111437348..111438078,3	MCF-7	breast:
2	chr4:110919650..110920356-chr4:111435760..111436727,2	MCF-7	breast:
3	chr4:110919705..110920572-chr4:111506934..111507598,2	MCF-7	breast:
4	chr4:110918900..110921696-chr4:110925248..110926781,2	K562	blood:
5	chr4:110920067..110920971-chr4:111437280..111437927,2	K562	blood:
6	chr4:110920018..110920622-chr4:111435741..111436686,5	K562	blood:
7	chr4:110919695..110920613-chr4:111429733..111430949,6	K562	blood:
8	chr4:110919633..110920604-chr4:111438733..111439372,2	K562	blood:
9	chr4:110919693..110920830-chr4:111431515..111432376,4	K562	blood:
10	chr4:110919744..110920598-chr4:111439423..111440711,5	K562	blood:
11	chr4:110919674..110920593-chr4:111431796..111432759,4	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000250511	Chromatin interaction
ENSG00000138798	Chromatin interaction

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10004390	1.00[EUR][1000 genomes]
rs10007208	1.00[EUR][1000 genomes]
rs1007050	1.00[EUR][1000 genomes]
rs10488880	1.00[EUR][1000 genomes]
rs11569124	1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11569132	0.93[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11569146	0.94[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11936595	1.00[EUR][1000 genomes]
rs11940838	1.00[EUR][1000 genomes]
rs17040933	1.00[EUR][1000 genomes]
rs28437024	1.00[EUR][1000 genomes]
rs41464250	1.00[EUR][1000 genomes]
rs4698796	1.00[EUR][1000 genomes]
rs56285361	1.00[EUR][1000 genomes]
rs56737575	1.00[EUR][1000 genomes]
rs6533467	1.00[EUR][1000 genomes]
rs6811614	0.92[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6828254	1.00[EUR][1000 genomes]
rs6829540	1.00[EUR][1000 genomes]
rs6832396	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6854247	1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72892672	1.00[EUR][1000 genomes]
rs73839166	1.00[EUR][1000 genomes]
rs73839504	1.00[EUR][1000 genomes]
rs73839508	1.00[EUR][1000 genomes]
rs73841124	1.00[EUR][1000 genomes]
rs7681770	1.00[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:110895000-110928600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:110901000-110929600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr4:110901400-110920800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr4:110906800-110920800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr4:110907000-110932400	Weak transcription	Psoas Muscle	Psoas
6	chr4:110907800-110927400	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr4:110910200-110920400	Weak transcription	Fetal Intestine Small	intestine
8	chr4:110910400-110935200	Weak transcription	Pancreas	Pancrea
9	chr4:110910600-110929800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr4:110910800-110926800	Weak transcription	Fetal Heart	heart
11	chr4:110918400-110920200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
12	chr4:110918600-110920800	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr4:110919000-110935200	Weak transcription	Left Ventricle	heart

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