The 2.0 version of rSNPBase

Variant report

Variant rs17042143
Chromosome Location chr1:214729555-214729556
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214726200-214729800 Weak transcription Aorta Aorta
2 chr1:214726200-214730800 Weak transcription HSMM muscle
3 chr1:214726200-214731000 Weak transcription NHEK skin
4 chr1:214726200-214731200 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr1:214726400-214729600 Weak transcription Fetal Intestine Large intestine
6 chr1:214726400-214730800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:214726400-214731200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr1:214726400-214731200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:214726400-214731200 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr1:214726400-214731400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr1:214726800-214731000 Weak transcription Muscle Satellite Cultured Cells --
12 chr1:214726800-214731000 Weak transcription NHLF lung
13 chr1:214726800-214731200 Weak transcription NHDF-Ad bronchial
14 chr1:214727000-214731200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:214727000-214731200 Weak transcription Hela-S3 cervix
16 chr1:214727000-214731200 Weak transcription HMEC breast
17 chr1:214727200-214730200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr1:214727200-214730800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:214727200-214731000 Weak transcription A549 lung
20 chr1:214727200-214731000 Weak transcription NH-A brain
21 chr1:214727200-214731000 Weak transcription Osteobl bone
22 chr1:214727200-214731200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:214727200-214731200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:214727200-214731400 Weak transcription HUVEC blood vessel
25 chr1:214727200-214732400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr1:214727200-214732600 Weak transcription Fetal Kidney kidney
27 chr1:214727400-214729800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr1:214727400-214731200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:214727400-214731200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr1:214727400-214731200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:214727400-214731200 Weak transcription Placenta Amnion Placenta Amnion
32 chr1:214727600-214731200 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr1:214727600-214731400 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr1:214727800-214730800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr1:214729000-214730400 Enhancers HepG2 liver
36 chr1:214729200-214729800 Enhancers GM12878-XiMat blood
37 chr1:214729400-214730400 Enhancers Fetal Intestine Small intestine

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Last update: Aug 31, 2015