The 2.0 version of rSNPBase

Variant report

Variant rs17042904
Chromosome Location chr3:16979105-16979106
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:16958000-16981800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr3:16959400-16986600 Weak transcription Aorta Aorta
3 chr3:16967000-16985000 Enhancers Primary T helper cells fromperipheralblood blood
4 chr3:16971600-16982400 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr3:16972400-16983600 Weak transcription Brain Angular Gyrus brain
6 chr3:16973400-16980400 Enhancers Primary T killer naive cells fromperipheralblood blood
7 chr3:16973800-16985000 Enhancers Primary T helper naive cells from peripheral blood blood
8 chr3:16974200-16982600 Enhancers Fetal Heart heart
9 chr3:16974800-16984800 Weak transcription Stomach Mucosa stomach
10 chr3:16975600-16985000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr3:16975600-16985800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
12 chr3:16975800-16985000 Enhancers Primary T killer memory cells from peripheral blood blood
13 chr3:16976000-16983800 Weak transcription Pancreas Pancrea
14 chr3:16976200-16981400 Weak transcription Right Atrium heart
15 chr3:16976400-16982400 Weak transcription Right Ventricle heart
16 chr3:16976400-16982400 Weak transcription Spleen Spleen
17 chr3:16976400-16983800 Weak transcription Gastric stomach
18 chr3:16977000-16979400 Enhancers Monocytes-CD14+_RO01746 blood
19 chr3:16977200-16979200 Enhancers Primary monocytes fromperipheralblood blood
20 chr3:16977200-16979400 Enhancers iPS-18 Cell Line embryonic stem cell
21 chr3:16977200-16980200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr3:16977400-16979200 Enhancers H1 Cell Line embryonic stem cell
23 chr3:16977400-16979200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
24 chr3:16977400-16979200 Enhancers Fetal Thymus thymus
25 chr3:16977400-16979200 Enhancers Ovary ovary
26 chr3:16977400-16979400 Enhancers HUES48 Cell Line embryonic stem cell
27 chr3:16977400-16979400 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr3:16977400-16979400 Enhancers Primary B cells from peripheral blood blood
29 chr3:16977400-16979400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr3:16977400-16980400 Enhancers Psoas Muscle Psoas
31 chr3:16977600-16979200 Enhancers Skeletal Muscle Male skeletal muscle
32 chr3:16977600-16979800 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr3:16977800-16979200 Enhancers Primary neutrophils fromperipheralblood blood
34 chr3:16977800-16979200 Enhancers Primary T cells fromperipheralblood blood
35 chr3:16977800-16979200 Enhancers Primary Natural Killer cells fromperipheralblood blood
36 chr3:16977800-16987400 Enhancers Primary T helper cells PMA-I stimulated --
37 chr3:16978000-16979800 Weak transcription Small Intestine intestine
38 chr3:16978000-16980000 Flanking Active TSS Primary hematopoietic stem cells blood
39 chr3:16978000-16985800 Enhancers Primary T helper naive cells fromperipheralblood blood
40 chr3:16978000-16991200 Weak transcription Adipose Nuclei Adipose
41 chr3:16978200-16979400 Enhancers Primary B cells from cord blood blood
42 chr3:16978200-16981400 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr3:16978200-16983000 Weak transcription Liver Liver
44 chr3:16978400-16979200 Enhancers Left Ventricle heart
45 chr3:16978400-16980600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr3:16978400-16981800 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr3:16978600-16981600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr3:16978800-16979600 Enhancers iPS-20b Cell Line embryonic stem cell
49 chr3:16978800-16980800 Enhancers Primary T cells from cord blood blood
50 chr3:16978800-16981600 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015