The 2.0 version of rSNPBase

Variant report

Variant rs28932173
Chromosome Location chr3:17051450-17051451
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17037000-17053200 Weak transcription Fetal Intestine Small intestine
2 chr3:17045000-17053800 Weak transcription Thymus Thymus
3 chr3:17045200-17052200 Weak transcription Aorta Aorta
4 chr3:17046200-17053200 Weak transcription Brain Inferior Temporal Lobe brain
5 chr3:17046600-17053000 Weak transcription Brain Substantia Nigra brain
6 chr3:17046800-17054200 Weak transcription Psoas Muscle Psoas
7 chr3:17046800-17054600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr3:17047000-17051800 Weak transcription Fetal Brain Female brain
9 chr3:17047000-17054200 Weak transcription Brain Anterior Caudate brain
10 chr3:17048000-17051600 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr3:17048000-17052600 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr3:17048200-17051600 Weak transcription Fetal Kidney kidney
13 chr3:17048200-17052000 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr3:17048200-17052400 Weak transcription Duodenum Mucosa Duodenum
15 chr3:17048200-17052600 Weak transcription Spleen Spleen
16 chr3:17048200-17053000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr3:17048200-17053000 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr3:17048200-17053200 Weak transcription Liver Liver
19 chr3:17048200-17053200 Weak transcription Stomach Mucosa stomach
20 chr3:17048200-17054200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr3:17048200-17054600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr3:17048200-17054600 Weak transcription Gastric stomach
23 chr3:17048200-17054600 Weak transcription Right Atrium heart
24 chr3:17048200-17054800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr3:17048400-17051800 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr3:17048400-17052000 Weak transcription Ovary ovary
27 chr3:17048400-17052200 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr3:17048400-17052600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr3:17048400-17052600 Weak transcription Right Ventricle heart
30 chr3:17048400-17053000 Weak transcription Pancreas Pancrea
31 chr3:17048400-17053200 Weak transcription Brain Angular Gyrus brain
32 chr3:17048400-17054000 Weak transcription Fetal Heart heart
33 chr3:17048400-17054600 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr3:17048400-17054800 Weak transcription H1 Cell Line embryonic stem cell
35 chr3:17048400-17054800 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr3:17048400-17054800 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr3:17048400-17054800 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr3:17048400-17054800 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr3:17048800-17052400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr3:17049400-17056200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr3:17049800-17051600 Weak transcription Fetal Intestine Large intestine
42 chr3:17049800-17053800 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr3:17050000-17055800 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr3:17050000-17056200 Weak transcription Stomach Smooth Muscle stomach
45 chr3:17050200-17051600 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr3:17050200-17052000 Weak transcription Fetal Muscle Trunk muscle
47 chr3:17050200-17054600 Weak transcription Brain Germinal Matrix brain
48 chr3:17050200-17056200 Weak transcription Lung lung
49 chr3:17050200-17059200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr3:17050400-17054600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015