Variant report

Variant	rs12233493
Chromosome Location	chr3:17043420-17043421
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs12054464	0.90[ASN][1000 genomes]
rs12233538	0.97[ASN][1000 genomes]
rs12233541	0.97[ASN][1000 genomes]
rs13072853	0.82[EUR][1000 genomes]
rs13073804	0.90[ASN][1000 genomes]
rs13083189	0.97[ASN][1000 genomes]
rs13096536	0.87[ASN][1000 genomes]
rs1550518	0.90[ASN][1000 genomes]
rs17042972	0.84[ASN][1000 genomes]
rs17272740	0.90[ASN][1000 genomes]
rs17272810	0.87[ASN][1000 genomes]
rs17272817	0.87[ASN][1000 genomes]
rs17272831	0.87[ASN][1000 genomes]
rs28932173	0.90[ASN][1000 genomes]
rs34437014	0.90[ASN][1000 genomes]
rs34824028	0.97[ASN][1000 genomes]
rs35100600	0.81[ASN][1000 genomes]
rs35307172	0.90[ASN][1000 genomes]
rs35941157	0.90[EUR][1000 genomes]
rs3935970	0.97[ASN][1000 genomes]
rs4130495	0.97[EUR][1000 genomes]
rs4290789	0.97[ASN][1000 genomes]
rs55942882	0.90[ASN][1000 genomes]
rs56060350	0.90[ASN][1000 genomes]
rs62246031	0.90[ASN][1000 genomes]
rs62247182	0.97[ASN][1000 genomes]
rs6442659	0.97[EUR][1000 genomes]
rs6778233	0.98[EUR][1000 genomes]
rs6789069	0.87[ASN][1000 genomes]
rs6796868	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6805550	0.98[EUR][1000 genomes]
rs7616589	0.97[ASN][1000 genomes]
rs7645276	0.96[EUR][1000 genomes]
rs7652293	0.90[ASN][1000 genomes]
rs9815788	0.90[ASN][1000 genomes]
rs9834723	0.97[ASN][1000 genomes]
rs9845137	0.97[ASN][1000 genomes]
rs9845551	0.98[EUR][1000 genomes]
rs9858664	0.80[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9870977	0.92[EUR][1000 genomes]
rs9881997	0.96[EUR][1000 genomes]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:17034400-17044800	Weak transcription	Aorta	Aorta
2	chr3:17035000-17047200	Weak transcription	Ovary	ovary
3	chr3:17037000-17053200	Weak transcription	Fetal Intestine Small	intestine
4	chr3:17037600-17050800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
5	chr3:17037800-17044800	Weak transcription	Thymus	Thymus
6	chr3:17038000-17044800	Weak transcription	Right Atrium	heart
7	chr3:17038000-17044800	Weak transcription	Right Ventricle	heart
8	chr3:17038000-17044800	Weak transcription	Spleen	Spleen
9	chr3:17038000-17047800	Weak transcription	Gastric	stomach
10	chr3:17038200-17045000	Weak transcription	Psoas Muscle	Psoas
11	chr3:17039600-17044600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
12	chr3:17040200-17044000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
13	chr3:17040200-17051000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
14	chr3:17040200-17051200	Weak transcription	Primary monocytes fromperipheralblood	blood
15	chr3:17041200-17043800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
16	chr3:17041200-17044000	Weak transcription	Primary T helper cells PMA-I stimulated	--
17	chr3:17041200-17044800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
18	chr3:17041200-17044800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
19	chr3:17041200-17045400	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chr3:17041200-17051400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
21	chr3:17041600-17044200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
22	chr3:17041600-17044600	Weak transcription	Fetal Heart	heart
23	chr3:17041800-17045000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
24	chr3:17043200-17048400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
25	chr3:17043400-17046800	Weak transcription	Primary B cells from cord blood	blood

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