The 2.0 version of rSNPBase

Variant report

Variant rs1550518
Chromosome Location chr3:16986989-16986990
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:16977800-16987400 Enhancers Primary T helper cells PMA-I stimulated --
2 chr3:16978000-16991200 Weak transcription Adipose Nuclei Adipose
3 chr3:16979000-16990600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr3:16979400-16989800 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr3:16983000-16988600 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr3:16983400-16987600 Enhancers Fetal Heart heart
7 chr3:16984000-16987200 Weak transcription Right Ventricle heart
8 chr3:16984000-16992600 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr3:16984200-17003400 Weak transcription Spleen Spleen
10 chr3:16984400-16987400 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr3:16984800-16988000 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr3:16985000-16987400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr3:16985000-16988200 Weak transcription Primary hematopoietic stem cells blood
14 chr3:16985000-16989000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr3:16985000-16989400 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr3:16985000-16989600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr3:16985000-16992400 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr3:16985000-17003400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr3:16985600-16990600 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr3:16985600-16992400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr3:16985600-17000400 Weak transcription Primary T cells from cord blood blood
22 chr3:16985800-16990800 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr3:16986000-16988000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr3:16986400-16990600 Weak transcription Primary B cells from peripheral blood blood
25 chr3:16986600-16987000 Enhancers Muscle Satellite Cultured Cells --
26 chr3:16986600-16987000 Weak transcription Psoas Muscle Psoas
27 chr3:16986600-16987400 Strong transcription Primary B cells from cord blood blood
28 chr3:16986600-16987400 Enhancers Aorta Aorta
29 chr3:16986600-16987400 Enhancers Right Atrium heart
30 chr3:16986600-16987600 Strong transcription Primary T cells fromperipheralblood blood
31 chr3:16986600-17000400 Weak transcription Left Ventricle heart
32 chr3:16986800-16987400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
33 chr3:16986800-16987400 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr3:16986800-16987600 Genic enhancers Primary T helper cells fromperipheralblood blood
35 chr3:16986800-17003000 Weak transcription Ovary ovary

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Last update: Aug 31, 2015