Variant report

Variant	rs17043697
Chromosome Location	chr1:216924808-216924809
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11572654	1.00[YRI][hapmap];0.95[AFR][1000 genomes]
rs12042592	1.00[YRI][hapmap]
rs17043567	1.00[YRI][hapmap]
rs17043642	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6671659	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7521774	1.00[YRI][hapmap]
rs954276	1.00[CEU][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[EUR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:216897400-216958600	Weak transcription	Pancreas	Pancrea
2	chr1:216911600-216934200	Weak transcription	Psoas Muscle	Psoas
3	chr1:216921600-216925000	Enhancers	Fetal Heart	heart
4	chr1:216922400-216925400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr1:216922400-216931400	Weak transcription	Right Atrium	heart
6	chr1:216922600-216925400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr1:216924400-216925200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr1:216924600-216925000	Enhancers	Brain Angular Gyrus	brain
9	chr1:216924800-216925000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr1:216924800-216925000	Enhancers	Fetal Brain Male	brain
11	chr1:216924800-216925000	Enhancers	Fetal Muscle Leg	muscle
12	chr1:216924800-216925000	Enhancers	Skeletal Muscle Male	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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