Variant report

Variant rs17058955
Chromosome Location chr13:39586850-39586851
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:39581600-39590800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr13:39581600-39592000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
3 chr13:39581600-39592400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr13:39581800-39589400 Strong transcription Brain Germinal Matrix brain
5 chr13:39581800-39592200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr13:39581800-39593200 Strong transcription HSMM muscle
7 chr13:39581800-39597000 Strong transcription HUES6 Cell Line embryonic stem cell
8 chr13:39582000-39588000 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr13:39582000-39596600 Strong transcription HUES48 Cell Line embryonic stem cell
10 chr13:39582000-39608200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr13:39582200-39590800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr13:39582200-39592600 Strong transcription Fetal Thymus thymus
13 chr13:39582200-39593400 Strong transcription Primary neutrophils fromperipheralblood blood
14 chr13:39582200-39596400 Strong transcription iPS-20b Cell Line embryonic stem cell
15 chr13:39582200-39596800 Strong transcription HUES64 Cell Line embryonic stem cell
16 chr13:39582200-39597400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr13:39582400-39590400 Strong transcription Skeletal Muscle Female skeletal muscle
18 chr13:39582400-39590400 Strong transcription GM12878-XiMat blood
19 chr13:39582400-39605400 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr13:39582600-39589600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
21 chr13:39582600-39592000 Strong transcription Placenta Placenta
22 chr13:39582600-39592400 Strong transcription Duodenum Mucosa Duodenum
23 chr13:39582600-39592400 Strong transcription Rectal Mucosa Donor 29 rectum
24 chr13:39582800-39593600 Strong transcription Primary T helper cells PMA-I stimulated --
25 chr13:39583000-39592400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr13:39583200-39592400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr13:39583200-39592400 Strong transcription Primary B cells from peripheral blood blood
28 chr13:39583200-39592400 Strong transcription Adipose Nuclei Adipose
29 chr13:39583200-39593200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr13:39583200-39606600 Strong transcription Primary monocytes fromperipheralblood blood
31 chr13:39583400-39587000 Weak transcription Placenta Amnion Placenta Amnion
32 chr13:39583400-39587600 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr13:39583400-39592400 Strong transcription Duodenum Smooth Muscle Duodenum
34 chr13:39583400-39592600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr13:39583400-39593200 Strong transcription Rectal Mucosa Donor 31 rectum
36 chr13:39583600-39587400 Weak transcription Psoas Muscle Psoas
37 chr13:39583600-39597200 Strong transcription iPS-18 Cell Line embryonic stem cell
38 chr13:39583800-39592400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr13:39583800-39592600 Strong transcription Primary T cells fromperipheralblood blood
40 chr13:39584000-39597600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr13:39584200-39591200 Strong transcription NHLF lung
42 chr13:39584200-39591400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr13:39584200-39592400 Strong transcription Osteobl bone
44 chr13:39584400-39587000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr13:39584400-39588800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr13:39584400-39589000 Strong transcription iPS-15b Cell Line embryonic stem cell
47 chr13:39584400-39589600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr13:39584400-39589600 Strong transcription Brain Hippocampus Middle brain
49 chr13:39584400-39590000 Strong transcription Fetal Lung lung
50 chr13:39584400-39590800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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