Variant report

Variant	rs17064351
Chromosome Location	chr13:75970966-75970967
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs17064449	0.90[YRI][hapmap]
rs59522855	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59760682	0.86[AFR][1000 genomes]
rs7321314	0.92[AFR][1000 genomes]
rs7326818	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7328556	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73535658	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7986697	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7995247	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498067	chr13:75178898-76012362	Enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
2	esv2761803	chr13:75943309-76161774	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:75959600-75973400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr13:75966000-75971800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr13:75966000-75972000	Weak transcription	Right Atrium	heart
4	chr13:75966000-75977000	Weak transcription	Right Ventricle	heart
5	chr13:75966800-75973400	Weak transcription	Psoas Muscle	Psoas
6	chr13:75967200-75971000	Weak transcription	HepG2	liver
7	chr13:75968000-75972200	Weak transcription	Left Ventricle	heart
8	chr13:75968400-75972000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr13:75968400-75973400	Weak transcription	HSMMtube	muscle
10	chr13:75968600-75972000	Weak transcription	Osteobl	bone
11	chr13:75969200-75972200	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr13:75969200-75975000	Weak transcription	Fetal Kidney	kidney
13	chr13:75969400-75973200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
14	chr13:75969400-75974200	Weak transcription	Small Intestine	intestine
15	chr13:75969600-75971600	Weak transcription	Fetal Heart	heart
16	chr13:75969800-75972000	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr13:75970200-75975400	Weak transcription	Ovary	ovary
18	chr13:75970400-75972200	Weak transcription	Pancreatic Islets	Pancreatic Islet

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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