Variant report

Variant	rs17072416
Chromosome Location	chr6:143590397-143590398
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs17072423	0.95[YRI][hapmap]
rs6935257	0.90[AMR][1000 genomes]
rs6935548	0.91[YRI][hapmap];0.81[AFR][1000 genomes]
rs73781139	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7765576	1.00[EUR][1000 genomes]
rs9496545	1.00[EUR][1000 genomes]
rs9496546	1.00[EUR][1000 genomes]

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143569000-143592000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr6:143570800-143609200	Weak transcription	Fetal Intestine Large	intestine
3	chr6:143582400-143591800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr6:143582600-143591200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr6:143582600-143591200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr6:143583400-143606000	Weak transcription	Fetal Intestine Small	intestine
7	chr6:143583800-143615400	Weak transcription	K562	blood
8	chr6:143585800-143592000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr6:143586800-143591200	Weak transcription	Fetal Muscle Leg	muscle
10	chr6:143586800-143592000	Weak transcription	Rectal Smooth Muscle	rectum
11	chr6:143587000-143591400	Weak transcription	Fetal Lung	lung
12	chr6:143587000-143592000	Weak transcription	Colon Smooth Muscle	Colon
13	chr6:143587000-143592000	Weak transcription	Stomach Smooth Muscle	stomach
14	chr6:143587200-143590800	Weak transcription	NHDF-Ad	bronchial
15	chr6:143587200-143591800	Weak transcription	Ovary	ovary
16	chr6:143587400-143591800	Weak transcription	Fetal Brain Male	brain
17	chr6:143587400-143592000	Weak transcription	HSMM	muscle
18	chr6:143588400-143590600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr6:143589000-143590600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr6:143589000-143607400	Weak transcription	Aorta	Aorta
21	chr6:143589400-143590400	Enhancers	Left Ventricle	heart
22	chr6:143589600-143591800	Weak transcription	Adipose Nuclei	Adipose
23	chr6:143589600-143592000	Weak transcription	Right Atrium	heart
24	chr6:143590000-143590400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr6:143590000-143591400	Strong transcription	Liver	Liver
26	chr6:143590000-143593000	Enhancers	Fetal Heart	heart
27	chr6:143590200-143590400	Enhancers	Osteobl	bone
28	chr6:143590200-143591200	Weak transcription	Fetal Stomach	stomach
29	chr6:143590200-143591200	Weak transcription	Right Ventricle	heart
30	chr6:143590200-143591400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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