Variant report

Variant	rs7765576
Chromosome Location	chr6:143590462-143590463
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs10484581	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs10484582	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs10484583	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12055523	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12055848	0.92[ASN][1000 genomes]
rs12176429	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs17072283	1.00[JPT][hapmap]
rs17072288	1.00[JPT][hapmap]
rs17072338	0.89[ASN][1000 genomes]
rs17072347	0.89[ASN][1000 genomes]
rs17072349	0.89[ASN][1000 genomes]
rs17072381	0.92[ASN][1000 genomes]
rs17072390	0.92[ASN][1000 genomes]
rs17072404	1.00[ASN][1000 genomes]
rs17072408	1.00[ASN][1000 genomes]
rs17072410	1.00[ASN][1000 genomes]
rs17072416	1.00[EUR][1000 genomes]
rs17629061	1.00[JPT][hapmap]
rs4458714	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4895604	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs4896625	1.00[JPT][hapmap]
rs4896630	0.92[ASN][1000 genomes]
rs4896631	0.92[ASN][1000 genomes]
rs6932032	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs6935257	1.00[YRI][hapmap];0.93[AFR][1000 genomes]
rs73781139	1.00[EUR][1000 genomes]
rs7767467	1.00[CHB][hapmap]
rs7769247	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs9321895	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs9321896	1.00[CHB][hapmap]
rs9373382	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs9373383	1.00[ASN][1000 genomes]
rs9373385	1.00[CHB][hapmap]
rs9376728	1.00[JPT][hapmap]
rs9376732	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9376733	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9376734	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs9376735	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9376736	1.00[CHB][hapmap]
rs9386028	1.00[JPT][hapmap]
rs9386029	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs9390062	1.00[JPT][hapmap]
rs9390071	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs9399431	0.92[ASN][1000 genomes]
rs9399432	1.00[ASN][1000 genomes]
rs9403453	1.00[JPT][hapmap]
rs9403454	1.00[JPT][hapmap]
rs9403465	1.00[JPT][hapmap]
rs9403467	1.00[JPT][hapmap]
rs9403469	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs9403470	0.92[ASN][1000 genomes]
rs9403471	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs9403472	1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs9403473	0.92[ASN][1000 genomes]
rs9403474	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9403476	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9496541	0.85[ASN][1000 genomes]
rs9496545	1.00[EUR][1000 genomes]
rs9496546	1.00[EUR][1000 genomes]

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143569000-143592000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr6:143570800-143609200	Weak transcription	Fetal Intestine Large	intestine
3	chr6:143582400-143591800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr6:143582600-143591200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr6:143582600-143591200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr6:143583400-143606000	Weak transcription	Fetal Intestine Small	intestine
7	chr6:143583800-143615400	Weak transcription	K562	blood
8	chr6:143585800-143592000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr6:143586800-143591200	Weak transcription	Fetal Muscle Leg	muscle
10	chr6:143586800-143592000	Weak transcription	Rectal Smooth Muscle	rectum
11	chr6:143587000-143591400	Weak transcription	Fetal Lung	lung
12	chr6:143587000-143592000	Weak transcription	Colon Smooth Muscle	Colon
13	chr6:143587000-143592000	Weak transcription	Stomach Smooth Muscle	stomach
14	chr6:143587200-143590800	Weak transcription	NHDF-Ad	bronchial
15	chr6:143587200-143591800	Weak transcription	Ovary	ovary
16	chr6:143587400-143591800	Weak transcription	Fetal Brain Male	brain
17	chr6:143587400-143592000	Weak transcription	HSMM	muscle
18	chr6:143588400-143590600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr6:143589000-143590600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr6:143589000-143607400	Weak transcription	Aorta	Aorta
21	chr6:143589600-143591800	Weak transcription	Adipose Nuclei	Adipose
22	chr6:143589600-143592000	Weak transcription	Right Atrium	heart
23	chr6:143590000-143591400	Strong transcription	Liver	Liver
24	chr6:143590000-143593000	Enhancers	Fetal Heart	heart
25	chr6:143590200-143591200	Weak transcription	Fetal Stomach	stomach
26	chr6:143590200-143591200	Weak transcription	Right Ventricle	heart
27	chr6:143590200-143591400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr6:143590400-143591200	Weak transcription	Osteobl	bone
29	chr6:143590400-143591400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr6:143590400-143592000	Weak transcription	Left Ventricle	heart

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