Variant report

Variant	rs9403473
Chromosome Location	chr6:143582761-143582762
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:143578203..143580061-chr6:143580169..143582946,2	K562	blood:
2	chr6:143581976..143584706-chr6:143586889..143589875,2	MCF-7	breast:
3	chr6:143568655..143572983-chr6:143580340..143584023,4	K562	blood:

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs10484581	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10484582	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10484583	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12055523	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs12055848	0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12176429	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1424924	1.00[AFR][1000 genomes]
rs1593289	1.00[AFR][1000 genomes]
rs17072338	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs17072347	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs17072349	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs17072381	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17072390	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17072404	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs17072408	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs17072410	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs17072450	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs17072501	1.00[AFR][1000 genomes]
rs17072541	1.00[AFR][1000 genomes]
rs17072544	1.00[AFR][1000 genomes]
rs2328475	1.00[AFR][1000 genomes]
rs4458714	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4482993	1.00[AFR][1000 genomes]
rs4895603	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs4895604	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs4895608	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs4895610	1.00[AFR][1000 genomes]
rs4896625	0.81[AMR][1000 genomes]
rs4896630	0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4896631	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4896654	1.00[AFR][1000 genomes]
rs6932032	0.93[ASN][1000 genomes]
rs7452873	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs7765576	0.92[ASN][1000 genomes]
rs7769247	0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs9321895	0.92[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs9321896	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs9373380	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9373382	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs9373383	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs9376732	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9376733	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9376734	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9376735	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs9386028	1.00[AFR][1000 genomes]
rs9386029	0.92[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs9390071	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs9399431	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9399432	1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs9403465	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs9403467	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs9403469	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs9403470	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9403471	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9403472	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9403474	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs9403476	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs9496541	0.93[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143545400-143588800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr6:143564200-143583000	Weak transcription	Pancreas	Pancrea
3	chr6:143569000-143592000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr6:143569200-143586600	Weak transcription	Stomach Smooth Muscle	stomach
5	chr6:143569600-143588600	Weak transcription	Aorta	Aorta
6	chr6:143570800-143609200	Weak transcription	Fetal Intestine Large	intestine
7	chr6:143574400-143583000	Weak transcription	Liver	Liver
8	chr6:143576200-143585800	Weak transcription	Fetal Lung	lung
9	chr6:143579000-143585600	Weak transcription	Fetal Stomach	stomach
10	chr6:143579800-143589400	Weak transcription	Left Ventricle	heart
11	chr6:143581000-143585600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr6:143582200-143586200	Weak transcription	NHDF-Ad	bronchial
13	chr6:143582400-143585600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr6:143582400-143587600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr6:143582400-143590000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr6:143582400-143591800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr6:143582600-143591200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr6:143582600-143591200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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