Variant report

Variant rs17072541
Chromosome Location chr6:143723142-143723143
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143706600-143757400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:143716800-143723600 Enhancers HMEC breast
3 chr6:143717000-143723600 Enhancers NHEK skin
4 chr6:143717000-143724200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr6:143718800-143723600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr6:143719200-143723600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr6:143719200-143753200 Weak transcription Aorta Aorta
8 chr6:143719400-143723400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr6:143719400-143726400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr6:143719600-143724200 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr6:143720600-143723200 Enhancers Primary T helper naive cells from peripheral blood blood
12 chr6:143720800-143723600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr6:143721200-143723400 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr6:143721400-143723200 Enhancers Primary T killer naive cells fromperipheralblood blood
15 chr6:143721400-143723200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr6:143721400-143723200 Enhancers Fetal Brain Female brain
17 chr6:143721400-143723400 Enhancers Primary T killer memory cells from peripheral blood blood
18 chr6:143721600-143723200 Enhancers Cortex derived primary cultured neurospheres brain
19 chr6:143721600-143723200 Enhancers HSMM muscle
20 chr6:143721600-143723600 Enhancers NH-A brain
21 chr6:143721800-143723200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr6:143722000-143723200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
23 chr6:143722200-143723200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr6:143722200-143723400 Enhancers Fetal Brain Male brain
25 chr6:143722200-143724200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr6:143722200-143725800 Weak transcription HSMMtube muscle
27 chr6:143722400-143723200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr6:143722400-143723200 Enhancers Placenta Amnion Placenta Amnion
29 chr6:143722400-143723200 Weak transcription Hela-S3 cervix
30 chr6:143722400-143724200 Enhancers HUES64 Cell Line embryonic stem cell
31 chr6:143722400-143724200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr6:143722600-143729800 Weak transcription HepG2 liver
33 chr6:143722800-143723600 Enhancers ES-I3 Cell Line embryonic stem cell
34 chr6:143722800-143726800 Weak transcription A549 lung
35 chr6:143722800-143727200 Weak transcription GM12878-XiMat blood
36 chr6:143723000-143723600 Enhancers H9 Cell Line embryonic stem cell
37 chr6:143723000-143723600 Enhancers iPS-20b Cell Line embryonic stem cell
38 chr6:143723000-143723800 Weak transcription Placenta Placenta
39 chr6:143723000-143724000 Enhancers HUES48 Cell Line embryonic stem cell
40 chr6:143723000-143724200 Enhancers HUES6 Cell Line embryonic stem cell
41 chr6:143723000-143725800 Weak transcription Muscle Satellite Cultured Cells --
42 chr6:143723000-143725800 Weak transcription Osteobl bone
43 chr6:143723000-143730600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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