Variant report

Variant	rs7767467
Chromosome Location	chr6:143606196-143606197
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10484581	1.00[CHB][hapmap]
rs10484582	1.00[CHB][hapmap]
rs10484583	1.00[CHB][hapmap]
rs12055523	1.00[CHB][hapmap]
rs12176429	1.00[CHB][hapmap]
rs1369235	1.00[JPT][hapmap]
rs4458714	1.00[CHB][hapmap]
rs4895604	1.00[CHB][hapmap]
rs6932032	1.00[CHB][hapmap];0.82[MEX][hapmap]
rs7765576	1.00[CHB][hapmap]
rs7769247	1.00[CHB][hapmap]
rs9321895	1.00[CHB][hapmap]
rs9321896	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs9373382	1.00[CHB][hapmap]
rs9373385	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs9376732	1.00[CHB][hapmap]
rs9376733	1.00[CHB][hapmap]
rs9376734	1.00[CHB][hapmap]
rs9376735	1.00[CHB][hapmap]
rs9376736	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.94[ASN][1000 genomes]
rs9376738	0.94[ASN][1000 genomes]
rs9386029	1.00[CHB][hapmap]
rs9390071	1.00[CHB][hapmap]
rs9403469	1.00[CHB][hapmap]
rs9403471	1.00[CHB][hapmap]
rs9403474	1.00[CHB][hapmap]
rs9403476	1.00[CHB][hapmap]

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143570800-143609200	Weak transcription	Fetal Intestine Large	intestine
2	chr6:143583800-143615400	Weak transcription	K562	blood
3	chr6:143589000-143607400	Weak transcription	Aorta	Aorta
4	chr6:143593200-143606800	Weak transcription	NHEK	skin
5	chr6:143593400-143607000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr6:143598600-143620200	Weak transcription	Brain Angular Gyrus	brain
7	chr6:143600600-143609200	Weak transcription	Brain Anterior Caudate	brain
8	chr6:143603000-143611000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr6:143603200-143606200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr6:143603200-143607000	Weak transcription	Fetal Heart	heart
11	chr6:143603200-143609600	Weak transcription	Brain Cingulate Gyrus	brain
12	chr6:143603200-143616800	Weak transcription	Brain Inferior Temporal Lobe	brain
13	chr6:143603200-143622200	Weak transcription	Brain Hippocampus Middle	brain
14	chr6:143604600-143607800	Weak transcription	Lung	lung
15	chr6:143604800-143608000	Weak transcription	Esophagus	oesophagus
16	chr6:143604800-143608200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr6:143604800-143609200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
18	chr6:143605000-143606400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr6:143605000-143608400	Enhancers	Osteobl	bone
20	chr6:143605200-143606600	Enhancers	Colon Smooth Muscle	Colon
21	chr6:143605200-143608600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr6:143605200-143608800	Enhancers	Fetal Stomach	stomach
23	chr6:143605200-143610400	Strong transcription	Liver	Liver
24	chr6:143605400-143606400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr6:143605400-143606800	Enhancers	Fetal Muscle Leg	muscle
26	chr6:143605400-143607600	Enhancers	Stomach Smooth Muscle	stomach
27	chr6:143605400-143614600	Weak transcription	NHDF-Ad	bronchial
28	chr6:143605600-143606400	Enhancers	Adipose Nuclei	Adipose
29	chr6:143605600-143608800	Enhancers	HMEC	breast
30	chr6:143605600-143622000	Weak transcription	HepG2	liver
31	chr6:143605800-143606200	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr6:143605800-143606200	Weak transcription	Ovary	ovary
33	chr6:143605800-143606400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr6:143605800-143607000	Weak transcription	NH-A	brain
35	chr6:143605800-143607400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
36	chr6:143605800-143609400	Enhancers	Breast Myoepithelial Primary Cells	Breast
37	chr6:143606000-143606800	Strong transcription	Fetal Intestine Small	intestine

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links