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Variant report
Variant
rs17076483
Chromosome Location
chr6:147280676-147280677
allele
A/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:4)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:4 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr6:147272009..147274564-chr6:147278363..147282178,4
K562
blood:
2
chr6:147276025..147277769-chr6:147278836..147281126,2
K562
blood:
3
chr6:147279985..147281514-chr6:147283901..147286266,2
K562
blood:
4
chr6:147279074..147280912-chr6:147281371..147282956,2
MCF-7
breast:
No data
No data
No data
Variant related genes
Relation type
ENSG00000272397
Chromatin interaction
Extended variants information (count: 10 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:10)
rs_ID
r
2
[population]
rs17076612
1.00[CEU][hapmap]
rs62434856
0.85[ASN][1000 genomes]
rs9373517
1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9377039
0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9390444
0.85[ASN][1000 genomes]
rs9390446
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9403833
0.85[ASN][1000 genomes]
rs9403839
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9403841
0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9497686
1.00[CEU][hapmap]
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links