Variant report
| Variant | rs17079416 |
|---|---|
| Chromosome Location | chr6:118026043-118026044 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:117998200-118026400 | Weak transcription | Esophagus | oesophagus |
| 2 | chr6:117999000-118039800 | Weak transcription | Gastric | stomach |
| 3 | chr6:117999000-118042000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 4 | chr6:117999200-118028200 | Weak transcription | Hela-S3 | cervix |
| 5 | chr6:117999200-118029600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 6 | chr6:118000800-118029400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 7 | chr6:118001200-118027400 | Weak transcription | Thymus | Thymus |
| 8 | chr6:118002600-118027600 | Weak transcription | Brain Angular Gyrus | brain |
| 9 | chr6:118003000-118026800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 10 | chr6:118003800-118026600 | Weak transcription | Lung | lung |
| 11 | chr6:118006000-118026600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 12 | chr6:118008800-118029600 | Weak transcription | Colonic Mucosa | Colon |
| 13 | chr6:118009400-118039800 | Weak transcription | Small Intestine | intestine |
| 14 | chr6:118012600-118039600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 15 | chr6:118014400-118029000 | Weak transcription | A549 | lung |
| 16 | chr6:118015600-118030200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 17 | chr6:118016600-118029400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 18 | chr6:118016600-118040000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 19 | chr6:118016800-118026400 | Weak transcription | Aorta | Aorta |
| 20 | chr6:118016800-118028800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 21 | chr6:118016800-118029400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 22 | chr6:118016800-118032400 | Weak transcription | Fetal Stomach | stomach |
| 23 | chr6:118017000-118026600 | Weak transcription | Right Ventricle | heart |
| 24 | chr6:118017000-118029800 | Weak transcription | Brain Substantia Nigra | brain |
| 25 | chr6:118017000-118033200 | Weak transcription | Fetal Intestine Small | intestine |
| 26 | chr6:118017000-118040000 | Weak transcription | Pancreas | Pancrea |
| 27 | chr6:118017400-118026600 | Weak transcription | Brain Germinal Matrix | brain |
| 28 | chr6:118017600-118029400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 29 | chr6:118017800-118029400 | Weak transcription | Fetal Brain Male | brain |
| 30 | chr6:118018000-118027400 | Weak transcription | Colon Smooth Muscle | Colon |
| 31 | chr6:118018000-118029600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 32 | chr6:118018000-118029600 | Weak transcription | Psoas Muscle | Psoas |
| 33 | chr6:118018600-118027400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 34 | chr6:118018800-118026200 | Weak transcription | HUVEC | blood vessel |
| 35 | chr6:118019000-118026600 | Weak transcription | Fetal Brain Female | brain |
| 36 | chr6:118021600-118028400 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 37 | chr6:118021600-118032600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 38 | chr6:118021800-118027000 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 39 | chr6:118021800-118028400 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 40 | chr6:118021800-118028400 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 41 | chr6:118022600-118028200 | Strong transcription | HepG2 | liver |
| 42 | chr6:118022800-118028000 | Strong transcription | HSMM | muscle |
| 43 | chr6:118022800-118028200 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 44 | chr6:118022800-118028200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 45 | chr6:118022800-118028400 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 46 | chr6:118022800-118028400 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 47 | chr6:118022800-118028400 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 48 | chr6:118023000-118026800 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 49 | chr6:118023000-118027200 | Strong transcription | HSMMtube | muscle |
| 50 | chr6:118023000-118027800 | Strong transcription | Primary B cells from peripheral blood | blood |
