Variant report
| Variant | rs17085098 |
|---|---|
| Chromosome Location | chr13:70026654-70026655 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:73)
| rs_ID | r2[population] |
|---|---|
| rs1041374 | 1.00[ASN][1000 genomes] |
| rs1041375 | 1.00[ASN][1000 genomes] |
| rs1041376 | 0.89[ASN][1000 genomes] |
| rs1330538 | 1.00[ASN][1000 genomes] |
| rs17609022 | 1.00[ASN][1000 genomes] |
| rs17609107 | 1.00[ASN][1000 genomes] |
| rs17609144 | 1.00[ASN][1000 genomes] |
| rs17609278 | 1.00[ASN][1000 genomes] |
| rs17609313 | 1.00[ASN][1000 genomes] |
| rs17609396 | 1.00[ASN][1000 genomes] |
| rs17609445 | 1.00[ASN][1000 genomes] |
| rs17609528 | 1.00[ASN][1000 genomes] |
| rs17609565 | 1.00[ASN][1000 genomes] |
| rs17609640 | 1.00[ASN][1000 genomes] |
| rs17610131 | 1.00[ASN][1000 genomes] |
| rs17610268 | 1.00[ASN][1000 genomes] |
| rs17610427 | 1.00[ASN][1000 genomes] |
| rs17610491 | 1.00[ASN][1000 genomes] |
| rs17682695 | 1.00[ASN][1000 genomes] |
| rs17683235 | 1.00[ASN][1000 genomes] |
| rs17683319 | 1.00[ASN][1000 genomes] |
| rs17683573 | 1.00[ASN][1000 genomes] |
| rs1854745 | 1.00[ASN][1000 genomes] |
| rs1854746 | 1.00[ASN][1000 genomes] |
| rs1962582 | 1.00[ASN][1000 genomes] |
| rs34717477 | 0.83[ASN][1000 genomes] |
| rs3901573 | 1.00[ASN][1000 genomes] |
| rs3916210 | 1.00[ASN][1000 genomes] |
| rs55650505 | 1.00[ASN][1000 genomes] |
| rs55720183 | 1.00[ASN][1000 genomes] |
| rs55769848 | 1.00[ASN][1000 genomes] |
| rs55818024 | 1.00[ASN][1000 genomes] |
| rs55892120 | 1.00[ASN][1000 genomes] |
| rs56112906 | 1.00[ASN][1000 genomes] |
| rs56134669 | 1.00[ASN][1000 genomes] |
| rs56148829 | 1.00[ASN][1000 genomes] |
| rs56193315 | 0.97[ASN][1000 genomes] |
| rs56225708 | 1.00[ASN][1000 genomes] |
| rs56237259 | 1.00[ASN][1000 genomes] |
| rs56240816 | 1.00[ASN][1000 genomes] |
| rs56333025 | 1.00[ASN][1000 genomes] |
| rs56369271 | 1.00[ASN][1000 genomes] |
| rs56392046 | 1.00[ASN][1000 genomes] |
| rs56397253 | 1.00[ASN][1000 genomes] |
| rs57926435 | 0.83[ASN][1000 genomes] |
| rs73204599 | 1.00[ASN][1000 genomes] |
| rs73206404 | 1.00[ASN][1000 genomes] |
| rs73206407 | 1.00[ASN][1000 genomes] |
| rs73206408 | 1.00[ASN][1000 genomes] |
| rs73206409 | 1.00[ASN][1000 genomes] |
| rs73206412 | 1.00[ASN][1000 genomes] |
| rs73206420 | 1.00[ASN][1000 genomes] |
| rs73206432 | 1.00[ASN][1000 genomes] |
| rs73206438 | 1.00[ASN][1000 genomes] |
| rs73206449 | 0.94[ASN][1000 genomes] |
| rs73206450 | 1.00[ASN][1000 genomes] |
| rs73206452 | 1.00[ASN][1000 genomes] |
| rs73206471 | 1.00[ASN][1000 genomes] |
| rs73206473 | 1.00[ASN][1000 genomes] |
| rs73206477 | 1.00[ASN][1000 genomes] |
| rs73206479 | 1.00[ASN][1000 genomes] |
| rs73206481 | 1.00[ASN][1000 genomes] |
| rs73206484 | 1.00[ASN][1000 genomes] |
| rs73206486 | 1.00[ASN][1000 genomes] |
| rs73206489 | 1.00[ASN][1000 genomes] |
| rs73208420 | 0.89[ASN][1000 genomes] |
| rs73208421 | 1.00[ASN][1000 genomes] |
| rs73208422 | 1.00[ASN][1000 genomes] |
| rs73208423 | 1.00[ASN][1000 genomes] |
| rs73208424 | 1.00[ASN][1000 genomes] |
| rs73208427 | 1.00[ASN][1000 genomes] |
| rs73208430 | 1.00[ASN][1000 genomes] |
| rs73208434 | 1.00[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv900480 | chr13:69891861-70027794 | Enhancers Weak transcription ZNF genes & repeats | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr13:70024800-70032000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
