Variant report

Variant	rs17089751
Chromosome Location	chr4:60556472-60556473
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10000997	1.00[AMR][1000 genomes]
rs10003895	1.00[AMR][1000 genomes]
rs10014559	1.00[AMR][1000 genomes]
rs10016946	1.00[AMR][1000 genomes]
rs10021212	1.00[AMR][1000 genomes]
rs17089821	1.00[AMR][1000 genomes]
rs2840135	1.00[AMR][1000 genomes]
rs28564619	1.00[AMR][1000 genomes]
rs28573076	1.00[AMR][1000 genomes]
rs28661979	1.00[AMR][1000 genomes]
rs28758823	1.00[AMR][1000 genomes]
rs73820658	1.00[AMR][1000 genomes]
rs9999335	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2760852	chr4:60424576-60863454	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv594254	chr4:60529232-60609054	Enhancers Active TSS Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv980424	chr4:60543627-60561102	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:60555600-60560600	Weak transcription	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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