The 2.0 version of rSNPBase

Variant report

Variant rs17095486
Chromosome Location chr10:118728567-118728568
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:118652000-118736200 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr10:118699200-118740600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr10:118699200-118748200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr10:118700000-118736800 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr10:118701000-118733400 Weak transcription Fetal Kidney kidney
6 chr10:118703400-118737000 Weak transcription Aorta Aorta
7 chr10:118703600-118740000 Weak transcription Duodenum Mucosa Duodenum
8 chr10:118703600-118752200 Weak transcription Gastric stomach
9 chr10:118708000-118735600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr10:118708200-118730800 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr10:118708200-118733200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr10:118708200-118734000 Weak transcription HSMM muscle
13 chr10:118708200-118744000 Weak transcription K562 blood
14 chr10:118708600-118736200 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr10:118710800-118731000 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr10:118711000-118735600 Weak transcription Pancreas Pancrea
17 chr10:118711000-118739600 Weak transcription Fetal Stomach stomach
18 chr10:118711200-118732600 Weak transcription HUVEC blood vessel
19 chr10:118711200-118740000 Weak transcription Adipose Nuclei Adipose
20 chr10:118711800-118732200 Weak transcription Hela-S3 cervix
21 chr10:118713000-118732800 Weak transcription HMEC breast
22 chr10:118713800-118732800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr10:118721400-118728800 Strong transcription Monocytes-CD14+_RO01746 blood
24 chr10:118721400-118730800 Weak transcription Brain Anterior Caudate brain
25 chr10:118721400-118731800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr10:118721600-118764000 Weak transcription Ovary ovary
27 chr10:118722400-118731600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr10:118723200-118740000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr10:118723400-118728600 Strong transcription Primary monocytes fromperipheralblood blood
30 chr10:118724000-118730600 Weak transcription Fetal Brain Male brain
31 chr10:118724000-118737800 Weak transcription Lung lung
32 chr10:118724200-118730400 Weak transcription Brain Germinal Matrix brain
33 chr10:118725200-118736800 Weak transcription Fetal Intestine Large intestine
34 chr10:118725200-118763000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr10:118725600-118740600 Weak transcription Fetal Intestine Small intestine
36 chr10:118726000-118733000 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr10:118726400-118735600 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr10:118726800-118730600 Weak transcription Brain Angular Gyrus brain
39 chr10:118727000-118728600 Strong transcription A549 lung
40 chr10:118727400-118731000 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr10:118727600-118731200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr10:118727600-118731600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr10:118727600-118743400 Weak transcription HepG2 liver
44 chr10:118727800-118728600 Enhancers Brain Cingulate Gyrus brain
45 chr10:118727800-118730600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr10:118727800-118730800 Weak transcription Fetal Brain Female brain
47 chr10:118728000-118728600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr10:118728000-118728600 Enhancers Brain Inferior Temporal Lobe brain
49 chr10:118728200-118728600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr10:118728200-118728800 Enhancers Brain Hippocampus Middle brain

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Last update: Aug 31, 2015