Variant report

Variant	rs11197835
Chromosome Location	chr10:118620459-118620460
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10886014	0.82[JPT][hapmap]
rs17095486	1.00[LWK][hapmap]
rs2531687	0.86[CHB][hapmap];0.82[JPT][hapmap];1.00[LWK][hapmap]
rs726525	0.85[JPT][hapmap]

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs11197835	DKFZp781N1041	cis	multi-tissue	Pritchard
rs11197835	KIAA1598	cis	multi-tissue	Pritchard
rs11197835	VWA2	cis	cerebellum	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118617800-118626800	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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