Variant report

Variant rs17106709
Chromosome Location chr5:146798035-146798036
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:146769400-146800600 Strong transcription HUES64 Cell Line embryonic stem cell
2 chr5:146769800-146810400 Strong transcription iPS-20b Cell Line embryonic stem cell
3 chr5:146770000-146800600 Strong transcription H1 Cell Line embryonic stem cell
4 chr5:146770200-146805200 Strong transcription iPS-18 Cell Line embryonic stem cell
5 chr5:146770200-146810800 Strong transcription HUES48 Cell Line embryonic stem cell
6 chr5:146770400-146800600 Strong transcription HUES6 Cell Line embryonic stem cell
7 chr5:146770600-146798200 Strong transcription Breast Myoepithelial Primary Cells Breast
8 chr5:146770600-146800400 Strong transcription ES-I3 Cell Line embryonic stem cell
9 chr5:146773600-146800600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr5:146774000-146799400 Strong transcription iPS-15b Cell Line embryonic stem cell
11 chr5:146777600-146800600 Strong transcription H9 Cell Line embryonic stem cell
12 chr5:146779800-146798400 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr5:146783400-146800800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr5:146784600-146800400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr5:146784800-146807400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr5:146785400-146808800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr5:146787000-146798800 Weak transcription Right Ventricle heart
18 chr5:146791200-146798200 Strong transcription Placenta Amnion Placenta Amnion
19 chr5:146792600-146798800 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr5:146795400-146798200 Genic enhancers NH-A brain
21 chr5:146795800-146798200 Genic enhancers Fetal Muscle Leg muscle
22 chr5:146795800-146800000 Enhancers Rectal Smooth Muscle rectum
23 chr5:146796000-146798200 Genic enhancers Fetal Stomach stomach
24 chr5:146796600-146798200 Enhancers Fetal Intestine Small intestine
25 chr5:146796600-146798200 Enhancers NHLF lung
26 chr5:146796800-146798400 Enhancers Lung lung
27 chr5:146796800-146799000 Enhancers Right Atrium heart
28 chr5:146796800-146799000 Enhancers Small Intestine intestine
29 chr5:146797000-146798200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr5:146797000-146798200 Enhancers Sigmoid Colon Sigmoid Colon
31 chr5:146797200-146798200 Enhancers Rectal Mucosa Donor 31 rectum
32 chr5:146797200-146798200 Enhancers Skeletal Muscle Female skeletal muscle
33 chr5:146797200-146798400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr5:146797200-146807200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr5:146797200-146808800 Weak transcription Brain Inferior Temporal Lobe brain
36 chr5:146797200-146810800 Weak transcription Brain Anterior Caudate brain
37 chr5:146797400-146807400 Weak transcription NHDF-Ad bronchial
38 chr5:146797400-146810800 Weak transcription Spleen Spleen
39 chr5:146797600-146798200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr5:146797600-146798200 Genic enhancers Aorta Aorta
41 chr5:146797600-146798400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr5:146797600-146798800 Strong transcription Brain Germinal Matrix brain
43 chr5:146797600-146799800 Genic enhancers Stomach Smooth Muscle stomach
44 chr5:146797600-146800200 Strong transcription Fetal Brain Female brain
45 chr5:146797600-146803000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr5:146797800-146798200 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr5:146797800-146798200 Genic enhancers Adipose Nuclei Adipose
48 chr5:146797800-146798200 Genic enhancers Duodenum Smooth Muscle Duodenum
49 chr5:146797800-146798200 Genic enhancers Fetal Brain Male brain
50 chr5:146797800-146798200 Genic enhancers Fetal Lung lung

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