Variant report

Variant rs17109958
Chromosome Location chr1:93912290-93912291
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93901000-93912800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:93901800-93912800 Weak transcription NH-A brain
3 chr1:93908200-93912400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr1:93908200-93912400 Weak transcription Adipose Nuclei Adipose
5 chr1:93908200-93912400 Weak transcription Pancreas Pancrea
6 chr1:93908200-93912400 Weak transcription HMEC breast
7 chr1:93908400-93912400 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr1:93908600-93912400 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr1:93908600-93912400 Weak transcription Fetal Intestine Small intestine
10 chr1:93908600-93912600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:93908600-93912800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:93909400-93912400 Weak transcription Stomach Mucosa stomach
13 chr1:93909400-93912400 Weak transcription Hela-S3 cervix
14 chr1:93909600-93912400 Weak transcription A549 lung
15 chr1:93909600-93912600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:93911400-93912400 Weak transcription Placenta Amnion Placenta Amnion
17 chr1:93912000-93912400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr1:93912000-93912400 Enhancers Liver Liver
19 chr1:93912000-93912400 Enhancers HepG2 liver
20 chr1:93912200-93912400 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr1:93912200-93912400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:93912200-93912400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:93912200-93912400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:93912200-93912400 Enhancers Brain Angular Gyrus brain
25 chr1:93912200-93912400 Enhancers Brain Anterior Caudate brain
26 chr1:93912200-93912400 Enhancers Brain Cingulate Gyrus brain
27 chr1:93912200-93912400 Enhancers Brain Hippocampus Middle brain
28 chr1:93912200-93912400 Enhancers Duodenum Mucosa Duodenum
29 chr1:93912200-93912400 Enhancers Fetal Brain Female brain
30 chr1:93912200-93912400 Flanking Active TSS Pancreatic Islets Pancreatic Islet
31 chr1:93912200-93912400 Enhancers Fetal Stomach stomach
32 chr1:93912200-93912400 Enhancers Skeletal Muscle Male skeletal muscle
33 chr1:93912200-93912400 Enhancers Skeletal Muscle Female skeletal muscle
34 chr1:93912200-93912400 Enhancers NHEK skin
35 chr1:93912200-93912600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:93912200-93912600 Enhancers Primary monocytes fromperipheralblood blood
37 chr1:93912200-93912600 Enhancers Primary hematopoietic stem cells blood
38 chr1:93912200-93912600 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr1:93912200-93912600 Enhancers Fetal Intestine Large intestine
40 chr1:93912200-93912800 Enhancers Cortex derived primary cultured neurospheres brain
41 chr1:93912200-93913000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
42 chr1:93912200-93913000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
43 chr1:93912200-93913000 Flanking Active TSS K562 blood
44 chr1:93912200-93913200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:93912200-93914800 Active TSS Rectal Mucosa Donor 29 rectum

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